Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1943 ATGGATCATGACATGGATCATGGAATGGCAATGGCACCAAAGTCATCATCATCTACCAATGACACTATGATGATGGGTCAGATGCATGACATGATGCACATGACATTTTTCTGGGGTAAAGATGCATTGATTCTCTTTGATAACTGGCCTGCTGGTAATTCTGGTAAGTATGTATTGGCCTTGATCCTTGTTTTCGCCATGTCCATACTCATCGAGTTTCTCTCAAGCACCCGGTTCATTAAACCCGGTTCAAACCCTATTGTGGCCGGTCTAGTTCAGACCCTTCTGCATGTCCTTAGGGTTGGCCTAGCTTATTTGGTTATGTTGGCTCTCATGTCTTTCAATGGTGGAGTGTTCTTGGTTGCTGTGCTTGGTCATGCTGTTGGGTTCTTCTTTCGTAGCCGTGCTTTCAAAAAACCACATCAAGATGAGAATTTCGATCTTCCTCCGTTATCTTGTTAA 462 0.4372 MDHDMDHGMAMAPKSSSSTNDTMMMGQMHDMMHMTFFWGKDALILFDNWPAGNSGKYVLALILVFAMSILIEFLSSTRFIKPGSNPIVAGLVQTLLHVLRVGLAYLVMLALMSFNGGVFLVAVLGHAVGFFFRSRAFKKPHQDENFDLPPLSC* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1943 153 Pfam Ctr copper transporter family 89 132 IPR007274 GO:0005375|GO:0016021|GO:0035434
Mtr4g1943 153 Pfam Ctr copper transporter family 34 78 IPR007274 GO:0005375|GO:0016021|GO:0035434
Mtr4g1943 153 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 10 151 IPR007274 GO:0005375|GO:0016021|GO:0035434
Mtr4g1943 153 PANTHER COPPER TRANSPORTER 1 10 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1943 Mtr-Chr4 32642765 32643498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1943 1 153 Inorganic Solute Cotransporters AT5G59030 45.238 9.55e-37 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1943 K14686 - gmx:100306175 211.075