Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1942 ATGGATGAGATGTCAATGGCACCAAAATCATCATCCTCTAACAATAGTACCATGATGATGAGCCTTAAGATGCAGGGCATGATACACATGACATTCTTCTGGGGTAAGGATTCGTTGATTCTCTTTAACAATTGGCCTGCGGGTAATACCAGTAAGTATGTAATGGCATTGTTCATGATTTTCATCGCTTCCATGCTCATGGAGTTACTCTCCTACACACCGTTCAAACCTGGTTCGAACCGTATGGTGGCCGGACTAGTTCAGACGCTTTTGCATGTCCTTAGGGTTGGATTGGCTTATTTGATCATGTTGGCACTCATGTCTTTCAATGGTGGAGTGTTCTTGGTTGTTGTACTTGGTCATGCTCTTGGATTCTTCGTATGTAGCCGTGCTTTTAAAGAACCACATCACTATGTGGCACTTTGA 426 0.4319 MDEMSMAPKSSSSNNSTMMMSLKMQGMIHMTFFWGKDSLILFNNWPAGNTSKYVMALFMIFIASMLMELLSYTPFKPGSNRMVAGLVQTLLHVLRVGLAYLIMLALMSFNGGVFLVVVLGHALGFFVCSRAFKEPHHYVAL* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1942 141 Pfam Ctr copper transporter family 80 128 IPR007274 GO:0005375|GO:0016021|GO:0035434
Mtr4g1942 141 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 132 IPR007274 GO:0005375|GO:0016021|GO:0035434
Mtr4g1942 141 PANTHER COPPER TRANSPORTER 1 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1942 Mtr-Chr4 32640488 32641190 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1942 23 133 Inorganic Solute Cotransporters AT5G59040 46.018 2.05e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1942 K14686 - gmx:100306175 155.606