Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1935 ATGAGAACTTTGGAGATGGATCATCTAAAGAATATGAGAGAATATTTTAGGAGTGGTATAACAAAGGAAGCATCTTGGAGAGAATCACAACTAAAAGGGTTGCGTCGTTTCCTAGTGGAAAAAGAGAATGATATCTTCATGGCCCTCATGCAAGATTTAGGGAAACACCGTCTTGAAGCTTTTAGAGATGAGATAGGAACGTTAGTGAAGACCTTAAATCTTGCATTAAAGTGTCTGAAAGATTGGATGTCAAGCAAGAAGGCTCCACTGCCTGCAATAGCATTGCTTTCAAGTGCAGAAATTGTTCATGAGCCTTTGGGTCTCGTCCTCATTATTTCATCTTGGAATTTGCCCTTTGGAGTGTCTTTGGAGCCACTGATAGGAGCTATAGCTGCTGGAAATGCAGCAGTGTTAAAACCTTCAGAGTTGTCTCCTGCATGTTCTTCTCTACTTGCTTCTGGCATTGCCACTTACTTGGACAATAAAGCCATTAAGGTTATCCAAGGGGGACCACAGGAATCCGACCAATTATTACGTCAAAAATGGGACAAAATCTTCTTTACAGGTAGTGCACGAGTGGGGAGCATTGTGATGTCAGCAGCTGCGAAGCACCTGACCCCTGTAACACTGGAGTTGGGTGGAAAATGCCCTGCTGTTGTGGACTCACTTTCATCTTCTTGGGATTTAGAGGTGGCTGTGAAGCGGATTCTTGTGGGAAAATACGGAACTTGTGCCGGTCAAGCATGCATAGCAATTGACTATGTCATTGTGGAAAAGAGATGCTGTTCAAAATTGGTGGAATTGATGAAGGTGTGGATCAAGAAAATGTTTGGAGACAACCCACAACATTCCAACACTATAGCAAGGATAGTTAATAAACAACACTTAACTAGATTAATGAAACTTCTTGATGATCAAAAGGTTCAAGAATCTGTGGTTTATGGTGGCTCAATTGACGAAGAAAACTTATTTATTGAGCCAACAATCTTGGTGGATCCCCCACTTGATGCAGCAATAATGTTAGATGAAGTTTTTGGCCCATTACTTCCAATTATTACTGTGGATAAGATTGAGGACAGTATTGAATTCATAAGCTCTAGGCCTAAGCCTCTTGCCCTTTATGTTTTCACCAAAAACAAAACACTGCAGAACAGAATGATATCTGAAACATCATCAGGCAGTGTTACTTTCAATGATGCAATTCTGCAATATGCAGCAGATAGTCTACCATTTGGAGGAGTAGGTGGAAGTGGATTTGGCATGTACCATGGGAAATTCTCCTTTGACACATTCAGTCACCAAAAAGCAATTGTTAGAAGAAGTTTCTTAACTGATTTTTGGTATAGATATCCACCATGGACAGCAAATAAGTTTCAACTACTTGAGGTCTCTTACAATTATGATTATTTGGGATTGGTCCTTGTTATTCTTGGATTAAAGAGACCATCAAAACGCCAGATCATACCTTGTTAA 1473 0.4026 MRTLEMDHLKNMREYFRSGITKEASWRESQLKGLRRFLVEKENDIFMALMQDLGKHRLEAFRDEIGTLVKTLNLALKCLKDWMSSKKAPLPAIALLSSAEIVHEPLGLVLIISSWNLPFGVSLEPLIGAIAAGNAAVLKPSELSPACSSLLASGIATYLDNKAIKVIQGGPQESDQLLRQKWDKIFFTGSARVGSIVMSAAAKHLTPVTLELGGKCPAVVDSLSSSWDLEVAVKRILVGKYGTCAGQACIAIDYVIVEKRCCSKLVELMKVWIKKMFGDNPQHSNTIARIVNKQHLTRLMKLLDDQKVQESVVYGGSIDEENLFIEPTILVDPPLDAAIMLDEVFGPLLPIITVDKIEDSIEFISSRPKPLALYVFTKNKTLQNRMISETSSGSVTFNDAILQYAADSLPFGGVGGSGFGMYHGKFSFDTFSHQKAIVRRSFLTDFWYRYPPWTANKFQLLEVSYNYDYLGLVLVILGLKRPSKRQIIPC* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1935 490 SUPERFAMILY ALDH-like 10 454 IPR016161 GO:0016491
Mtr4g1935 490 Pfam Aldehyde dehydrogenase family 22 437 IPR015590 GO:0016491
Mtr4g1935 490 PIRSF ALDH 1 473 IPR012394 GO:0006081
Mtr4g1935 490 PANTHER ALDEHYDE DEHYDROGENASE 7 487 - -
Mtr4g1935 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 13 435 IPR016162 GO:0016491
Mtr4g1935 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 214 417 IPR016163 GO:0016620
Mtr4g1935 490 PANTHER ALDEHYDE DEHYDROGENASE 7 487 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1935 Mtr-Chr4 32540773 32546229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1935 1 481 Aldehyde Dehydrogenase Gene Family AT4G36250 53.015 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1935 K00128 - gmx:100817701 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1935 4 32540773 32546229 Mtr4g1935 4 32540773 32546229 ECH
Mtr2g3390 2 47950066 47953984 Mtr4g1935 4 32540773 32546229 PCT