Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1930 ATGGGAGCTCGTTGCTCTAAACTCTCTCTATGCTGGTGGCCTTCTCATATCAAATCAAATCATCACAACCTCTCTGATAATGATGATGATGGGAGCAAGAAACAGAAGGATTCTTCTGTTGGTTTTGCTGAATACAGTTTGGATCAACTAAGAGTTGCAACAGAAGGATTTTCATCAGACAACATTGTCTCTGAACATGGTGAAAAAGCTCCTAATGTTGTCTACAGAGGTTGTCTTGAAGATGATAGGTTGGTTGCTGTGAAGCGTTTCAACAAGTCTGCTTGGCCTGATTCTCGTCAATTCCTAGAGGTAGCACGAGCCGTGGGGGAGCTAAGGAGTGAAAGATTAGCTAACTTGGTTGGATGTTGCATAGATGGAGACGAGAGATTGCTTGTTGCTGAGTTCATGCCAAATGAAACTCTCTCTAAACATCTTTTTCATTGGGATGTCCAACCCATGAAATGGGCAATGAGGCTGAGGGTAGCTTTGTATTTAGCACAAGCCTTGGAATACTGCAATAGCAGAGGAAAGGCATTGTACCATGATCTTAATGCTTATAGAATTTTATTTGATCAGGAAGGAAACCCTAGACTCTCTTGTTTTGGACTCATAAAAAACAGTAGAGATGGCAAAAGCTATAGCACAAATTTAGCCTTCACTCCTCCAGAGTACTTAAGGACAGGAAGATTCACCCCTGAAAGTGTAATTTACAGCTTTGGAACCTTATTGCTTGATCTTTTAAGTGGAAAGCATATTCCACCGAGTCATGCACTTGATCTTATACGAGGCAAAAACTTTCAAATGTTGATGGACTCATGTTTGGAAGGTCATTTTTCAAATGATGATGGTACTGAACTAGTGAGATTAGCTTCGCGTTGTTTACAATACGAACCTCGTGAGAGACCAAATGCCAAGTCCCTTGTGACTGCTCTCACCCCTCTTCAGAAAGAAACTTCAGTATTGTCATATGTTTCAATGGGCCTACCAGATAGGAGTCTATCATCAAAAGAAACAGTTACAATAACGCAGTTTGGTGAAGCTTGTTCAAGAAGAGATCTGACTGCAATACATGAAATTTTGGAAAAGGTGGGCTACAAGGACGAAGAACATGTTGCGAATGAGCTATCCTTTCAAATGTGGACAAATCAAATACAAGATACACTAAATTTCAAGAAGCGTGGTGATTCGGCTTTTCACGCAAAAGACTTCTCTACGGCCATTGACTGCTATACCCAATTTATCGATGGTGGCACCATGGTATCGCCAACTGTGTACGCTAGGCGCTGCCTGTGCTACATGATGAATGACATGGCACAAGAAGCACTTGGAGACGCAATGCAAGCTCAGTCGATAGCTCCCACTTGGCCAACTGCATTCTATCTTCAAGCAGTTTCACTCTCCAGCCTTGGCATGGATAATGATGCACAAGAAAGTCTCAAAGATGGCAAAACACTGGAAACTAGAAAGCATTGGAATTGA 1479 0.4185 MGARCSKLSLCWWPSHIKSNHHNLSDNDDDGSKKQKDSSVGFAEYSLDQLRVATEGFSSDNIVSEHGEKAPNVVYRGCLEDDRLVAVKRFNKSAWPDSRQFLEVARAVGELRSERLANLVGCCIDGDERLLVAEFMPNETLSKHLFHWDVQPMKWAMRLRVALYLAQALEYCNSRGKALYHDLNAYRILFDQEGNPRLSCFGLIKNSRDGKSYSTNLAFTPPEYLRTGRFTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFQMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVTALTPLQKETSVLSYVSMGLPDRSLSSKETVTITQFGEACSRRDLTAIHEILEKVGYKDEEHVANELSFQMWTNQIQDTLNFKKRGDSAFHAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLCYMMNDMAQEALGDAMQAQSIAPTWPTAFYLQAVSLSSLGMDNDAQESLKDGKTLETRKHWN* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1930 492 Gene3D Phosphorylase Kinase; domain 1 31 135 - -
Mtr4g1930 492 Gene3D Transferase(Phosphotransferase) domain 1 137 328 - -
Mtr4g1930 492 SUPERFAMILY Protein kinase-like (PK-like) 38 317 IPR011009 -
Mtr4g1930 492 SUPERFAMILY TPR-like 385 481 IPR011990 GO:0005515
Mtr4g1930 492 Gene3D Tetratricopeptide repeat domain 385 491 IPR011990 GO:0005515
Mtr4g1930 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 490 IPR045845 GO:0004672|GO:0009742
Mtr4g1930 492 Pfam Protein tyrosine and serine/threonine kinase 74 311 IPR001245 GO:0004672|GO:0006468
Mtr4g1930 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 490 - -
Mtr4g1930 492 ProSiteProfiles Protein kinase domain profile. 60 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1930 Mtr-Chr4 32481800 32485913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1930 14 311 Glycoside Hydrolase AT3G07070 32.515 1.58e-41 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Mtr4g1930 PK_Tyr_Ser-Thr 3.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1930 - - gmx:732542 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1930 4 32481800 32485913 Mtr4g1930 4 32481800 32485913 ECH