Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1917 ATGAAGCAAATGGAACACGAGAAAGCGCCTATCTCAGATGCAAGATCAATAGAGGAAACTGGAATACCTATGACAACATTGTCACTTTCCTCGCGCAAAAATTCTGTTTGTCGTTTTTCTTCGAAGGAAAAGAGTGTTGGAGCGTCGAATGAGTCCGCGAAGAAACTTTCTTTACTAATAGTTTTCTATGCTATTGTTATGATTGTTGAATTTGTTGGGGGTTTGAAAGCTCACAGCTTATCTGTTATTAGTGATGCTGCACATTTGCTTTCTGATATTGGTGGATTTGCAATCTCTCTATTTGCAGTGTGGGCTTCGGGTTGGGAGGCAACGCCTCATCAATCTTTCGGGTATAATCGACTTGAGGTTTTAGGTGCTCTTATATCTGTTCAGTTAATTTGGTTCATATCTGGTTTTTTGATATATGAAGCATTTGGTAGACTTGTTTATAAAAATAATAGAGTGAATGGAAAGCTCATGTTTGCAATTGCCACATTTGGGTTTGTTCTTAACTGTATCATGGTTTTATGGCTTGGTCATGATCATCATCATGGTTTTGGACACTCGGGTCATGGTCATCATCACGGGCACAATCATGATCACAGTCATCATCATCATCAACATGGTCATGATCAGAGTCATCATCAATGCCATGGAGACTCGGATCATGATCATGGGATGGAGGAACTACCTAAAATAACTGATGAGGAGAACCTTACCATGCTTTCAAATGGTAAGAAGAATACTAATGTTTTGAATATAAATATCCAAGGGGCTTATTTGCATGTGATGACTGATATGATTCAATCTTTTGGAGTGATGATTGCTGGAGGAGTAATATGGGCTAAACCAGAATGGTTTATCGTTGATCTTTTATGTACTCTAATATTCTCTGTTTTATCCTTAAGTACTACTCTACCAATGCTTAGGAATATTTTTGGAATTCTAATGGAGAGAACGCCAAGTGAGATTAATGTCATTCAGCTGGAAAATGGTCTTAGATGTATCAAGGGAGTGCAGGAGGTTCATGATTTGCATGTTTGGGCTATAACAGTTGGAAAACTGTTTCTATCTTGTCATGTAGTGGCTGAACCTGGCATAAATTCCATTGAATTACTTTCTGTGATTAAACAATATTGTGAAAACACTTATCAAATACAACATGTAACCATACAAATTGAGTAA 1185 0.3747 MKQMEHEKAPISDARSIEETGIPMTTLSLSSRKNSVCRFSSKEKSVGASNESAKKLSLLIVFYAIVMIVEFVGGLKAHSLSVISDAAHLLSDIGGFAISLFAVWASGWEATPHQSFGYNRLEVLGALISVQLIWFISGFLIYEAFGRLVYKNNRVNGKLMFAIATFGFVLNCIMVLWLGHDHHHGFGHSGHGHHHGHNHDHSHHHHQHGHDQSHHQCHGDSDHDHGMEELPKITDEENLTMLSNGKKNTNVLNINIQGAYLHVMTDMIQSFGVMIAGGVIWAKPEWFIVDLLCTLIFSVLSLSTTLPMLRNIFGILMERTPSEINVIQLENGLRCIKGVQEVHDLHVWAITVGKLFLSCHVVAEPGINSIELLSVIKQYCENTYQIQHVTIQIE* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1917 394 Gene3D Cation efflux protein transmembrane domain 52 316 IPR027469 -
Mtr4g1917 394 MobiDBLite consensus disorder prediction 213 228 - -
Mtr4g1917 394 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 326 394 IPR036837 -
Mtr4g1917 394 MobiDBLite consensus disorder prediction 188 212 - -
Mtr4g1917 394 MobiDBLite consensus disorder prediction 188 228 - -
Mtr4g1917 394 PANTHER METAL TOLERANCE PROTEIN B 22 394 - -
Mtr4g1917 394 SUPERFAMILY Cation efflux protein transmembrane domain-like 54 318 IPR027469 -
Mtr4g1917 394 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 22 394 - -
Mtr4g1917 394 TIGRFAM CDF: cation diffusion facilitator family transporter 54 394 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Mtr4g1917 394 Pfam Cation efflux family 58 317 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1917 Mtr-Chr4 32388504 32391373 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1917 37 394 Inorganic Solute Cotransporters AT2G46800 46.381 4.35e-101 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1917 K14689 - gmx:100789520 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1917 4 32388504 32391373 Mtr4g1917 4 32388504 32391373 ECH