Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1914 ATGGAGTCTGATCAACATGATAAAGGTGGTGATGATCAAGATGCAAAACAAGTAAACCCTAGATCCTATGAGTGCAATTTTTGCAAGAGAGGATTCTCTAATGCACAAGCTCTTGGTGGACACATGAATATTCATAGGAAAGATAAAGCAAAGCTCAAACAACAATCTTCAACAAATTACCAAACTCAATTACCATCTAATTTGGAGGGAAGTTCTAGTGAAGACCTCAACAAATTATTACCAAACTTGAATACTAATATTGTGTCTCAACAAGCCCCTTCAAGAGGTGATGAAATTCTTGTAACTCAAGTGAGACAACAACTTCCACTTTTTGCTGAATCACCAACTAGAAATGAAACACAAATTAATCCACAAGGTCAAGTTCAAAGGGAAATTATTACTACACAAGAGGCTTTGTTATTATCTGCTCAAGATTCTTCATCGGAGTTAGACCTTGAACTAAGATTAGGGCCTGAGCCACATGATTCATCAAAGCCAACGGGTACCAGAAAATTCTTTTAA 522 0.3659 MESDQHDKGGDDQDAKQVNPRSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQSSTNYQTQLPSNLEGSSSEDLNKLLPNLNTNIVSQQAPSRGDEILVTQVRQQLPLFAESPTRNETQINPQGQVQREIITTQEALLLSAQDSSSELDLELRLGPEPHDSSKPTGTRKFF* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1914 173 Gene3D Classic Zinc Finger 12 78 - -
Mtr4g1914 173 SUPERFAMILY beta-beta-alpha zinc fingers 19 50 IPR036236 -
Mtr4g1914 173 Pfam C2H2-type zinc finger 23 47 - -
Mtr4g1914 173 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Mtr4g1914 173 MobiDBLite consensus disorder prediction 54 77 - -
Mtr4g1914 173 PANTHER OS07G0101800 PROTEIN 2 165 - -
Mtr4g1914 173 MobiDBLite consensus disorder prediction 49 77 - -
Mtr4g1914 173 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 2 165 - -
Mtr4g1914 173 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1914 Mtr-Chr4 32361262 32362375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1914 21 169 C2H2 Transcription Factor Family AT3G53820 35.762 6.02e-20 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr4g1914 zf-C2H2_6 1.4e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1914 - - gmx:100527724 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1914 4 32361262 32362375 Mtr4g1914 4 32361262 32362375 ECH