Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1906 ATGGGTGAAGAGGTTCGAACAGACGAAGAACGTGTAACGGAGTGGGAAAAGGGTCTCCCTAACCTCCACGATCTCACTCCTCTTTCCATGGCGTTGATCCCACCGGAGCTCGCTTCCGCTTTCAGCATCTCCCCGGAGCCTCACCGTACTCTCTTCGACGTTAACCGTGCCTCTCGAAACACACTTTCTCTCCTCCGAAGCAACTCCGGAACAATCACCAATCAAATCAATCAAACTATGTCCTGCGAAATAGAAGATATAGAAGAAGACGAAGAACCCGATCGAGACGGGTCGGGTTCGGATTCACGAAAACATCGAAAAATAGATTCTGTTATAGAGGAAGTGGAAGCTGAAGCAGATTCGGCTGTTAGAACAACGGAAACGATAAAAAGGCCGAGGTTAGTGTGGACCCCACAGTTACATAAAAGATTTGTTGATGTTGTTGCTCATCTTGGGATAAAGAACGCGGTTCCGAAAACGATTATGCAGTTGATGAATGTTGAAGGGTTAACAAGAGAAAATGTTGCTAGTCATTTACAGAAATATCGTCTTTATTTGAAGAGAATGCAAGGTCTTTCAAATGATGCTCCTTCTTCTTCTGATCATCTTTTTGCTTCTACACCTGTGCCACAGAGTTTGCATGAAACTGCTTCTGCTAATCATTCGAATTCTCATTCTCATTCTCATTCACATTCGCATCATTCTGTAACTATTCCTATGCCTTATCCACCACCACCTTCGAGTATGATGTCAATGCCGCCTATGATTGGTATGGGACATCATCCACATGGGCATATGGGGATGAGTTTGCCTCCTCCTTCTGGTGGTTCTAGCTCTTATCGTTCGCATCCGTTTAATATGATGCATCATAGGGATTGGCCTCCGAATCCTCATTCTCATTCTCATCCTCATATGTCTTCTAATGATAGTAATAAATAA 939 0.4388 MGEEVRTDEERVTEWEKGLPNLHDLTPLSMALIPPELASAFSISPEPHRTLFDVNRASRNTLSLLRSNSGTITNQINQTMSCEIEDIEEDEEPDRDGSGSDSRKHRKIDSVIEEVEAEADSAVRTTETIKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNDAPSSSDHLFASTPVPQSLHETASANHSNSHSHSHSHSHHSVTIPMPYPPPPSSMMSMPPMIGMGHHPHGHMGMSLPPPSGGSSSYRSHPFNMMHHRDWPPNPHSHSHPHMSSNDSNK* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1906 312 MobiDBLite consensus disorder prediction 214 312 - -
Mtr4g1906 312 MobiDBLite consensus disorder prediction 86 107 - -
Mtr4g1906 312 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 311 - -
Mtr4g1906 312 SUPERFAMILY Homeodomain-like 128 188 IPR009057 -
Mtr4g1906 312 Pfam Myb-like DNA-binding domain 135 183 IPR001005 -
Mtr4g1906 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 187 IPR017930 -
Mtr4g1906 312 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 132 184 IPR006447 GO:0003677
Mtr4g1906 312 Gene3D - 128 190 - -
Mtr4g1906 312 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 311 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1906 Mtr-Chr4 32297263 32300571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1906 1 215 G2-like Transcription Factor Family AT3G46640 57.741 2.93e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr4g1906 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1906 - - aprc:113858844 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1906 4 32297263 32300571 Mtr4g1906 4 32297263 32300571 ECH