Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1892 ATGTTTTCTACTGAAACACTCGTAGAAAATTTTCCTGGTTCTGTTAACGGATGCATGTTTGGAAACATACCCGTGTCTGTTTTTTCAAACCAAAACCCAGAAAACGCGTTTAAATTCGAAGATTCAAATTCAATATCACCTTCAAGTGATTCTGTTCCTTCTTCTGTAATAACCTCAAATGGTGAATCTTCTGAGAGTAGTAAGTATTCAAATCCTATTCTTAGATATATAAGTGATATTCTTATGGATGAAGAAGATTTGGAGACAAAGCCTTGTATGTTGCAAGATTGTTTGAAGCTTCAAGCTGCTGAAAAATCGTTTTATGATGTTTTAGGATCAGTAACTGGAACTAGTTCTAGTTCTGAGAGCTATAGTAATTGTAGTTATAATACTGATAATTCTGTTGTTGATTGCGATTCGCCGGAAAATAATGCATATGAGGTGTTTGATAAAATTCCTTATGATCCGCGAGGTTTTTTCGGTTCTCCGAGTGATGTTTGGAAGATGAATGAAGAGGGTAGTTTTGTTTTGGGTTCTAGAGGTTTAGGGGAAAAGAGAGGTTATTTGATGAATTGTAATGATATTGGTATTTCACATGAAGAAGATCTGAGAAGAAACAAGGTTTCAGCTGTTTATTATGATGATACAGAGTTATCAGAGATGTTTGATGATGTTCTTCTTTGTAAGGATGGTAAAAGTCCGTCGATTTTTTGTGATAATTCTGAGTCGTCGCAATCACAGATTTCTGGTTCAGGAAGATCTAATGGAACCTCTAATGGAAAGACATCGCGATCCAAGAAAGGTTCCGGTAAGGGGAAAAAACTAAGTACTACGGTAGATTTATGGACTTTGTTAACTCAATGTGCACAAGCTGTTGGTAGCTATGATCAAAGGAATGCAAATGATATACTGAAGCAGATTAGGCAGCATTCTTCGCCAAGTGGCGATGGACTTCAGCGTTTAGCTCATTACTTTGCTGATGGACTTGAGGCGCGATTATCTGCTGGTACACCGATGTATAAACTCCTTCAGTCATCGTCTGCTGCAGATATGTTGAGAGCTCATAAAGTTTATATCACAGCTTCTCCATTTCAAAGGATGTCGAATTTCTTGGCCAACAGAACTATTCTGAAGCTGGTAGAAAATAAAAGCAGCCTCCACATTATCGACTTTGGTGTTTTCTATGGCTTTCAGTGGCCTTGTCTCATCCAGCGTCTTTCAGAGAGATCCGGTGGGCCACCAAGGCTTCGTATTACAGGAATTGATCTTCCTCAGCCAGGATTTAGGCCTGCAGAAAGGGTTGAAGAGACAGGTCGGCGACTTGTGAAGTACTGCAAGAGGTTTGGAGTTCCATTTGAGTACAATTGCCTTGCTCAGAAATGGGACACTTTAAGACTTGAGGATCTCAAGATTGATAGAGAAGAAGTAACAGTGGTTAACTGCTTACACAGATTGAAGAATGTTTCTGATGAAACGGTGACGGAAAATTGTCCTAGAGATGCTGTGTTGAGGTTGATCAGGAGGATTAATCCAAACATTTTCATACATGGTGTAGTGAATGGAACTTATAACGCACCCTTTTTTCTTACTAGGTTCAGGGAAGCACTATTCCATTTCTCATCATTGTTTGATATGCTTGAAGCTACGGTGCCGCGTGAAGATGATCAATATAGGCTGATGATTGAGAAAGGGTTATTCGGAAGGGATGCAGTAAATGTGATAGCTTGTGAAGGAGCAGAGAGGGTTGAAAGGCCAGAGACTTACAAGCAGTGGCAGGTTAGGAACAAGAGAGCAAGGTTCAAACAACTTCCATTGGCTCCAGAACTGGTGGATAGAGTGAAAGAAATGGTGAAGAAGGAGTATCCGAAAGATTTTGTAGTTGATGAGGATGGGAAGTGGGTTCTGCAGGGTTGGAAAGGGCGTATTCTGCTAGCTGTTTCTTGCTGGGTTCCTTCTTAA 1959 0.4007 MFSTETLVENFPGSVNGCMFGNIPVSVFSNQNPENAFKFEDSNSISPSSDSVPSSVITSNGESSESSKYSNPILRYISDILMDEEDLETKPCMLQDCLKLQAAEKSFYDVLGSVTGTSSSSESYSNCSYNTDNSVVDCDSPENNAYEVFDKIPYDPRGFFGSPSDVWKMNEEGSFVLGSRGLGEKRGYLMNCNDIGISHEEDLRRNKVSAVYYDDTELSEMFDDVLLCKDGKSPSIFCDNSESSQSQISGSGRSNGTSNGKTSRSKKGSGKGKKLSTTVDLWTLLTQCAQAVGSYDQRNANDILKQIRQHSSPSGDGLQRLAHYFADGLEARLSAGTPMYKLLQSSSAADMLRAHKVYITASPFQRMSNFLANRTILKLVENKSSLHIIDFGVFYGFQWPCLIQRLSERSGGPPRLRITGIDLPQPGFRPAERVEETGRRLVKYCKRFGVPFEYNCLAQKWDTLRLEDLKIDREEVTVVNCLHRLKNVSDETVTENCPRDAVLRLIRRINPNIFIHGVVNGTYNAPFFLTRFREALFHFSSLFDMLEATVPREDDQYRLMIEKGLFGRDAVNVIACEGAERVERPETYKQWQVRNKRARFKQLPLAPELVDRVKEMVKKEYPKDFVVDEDGKWVLQGWKGRILLAVSCWVPS* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1892 652 Pfam GRAS domain family 283 649 IPR005202 -
Mtr4g1892 652 MobiDBLite consensus disorder prediction 39 68 - -
Mtr4g1892 652 MobiDBLite consensus disorder prediction 239 265 - -
Mtr4g1892 652 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 27 123 - -
Mtr4g1892 652 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 184 651 - -
Mtr4g1892 652 ProSiteProfiles GRAS family profile. 272 650 IPR005202 -
Mtr4g1892 652 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 27 123 IPR005202 -
Mtr4g1892 652 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 184 651 IPR005202 -
Mtr4g1892 652 MobiDBLite consensus disorder prediction 239 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1892 Mtr-Chr4 32067149 32069678 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1892 11 651 GRAS Transcription Factor Family AT2G29060 43.666 1.65e-179 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr4g1892 GRAS 4e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1892 - - lja:Lj3g3v3213190.1 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1892 4 32067149 32069678 Mtr4g1892 4 32067149 32069678 ECH
Mtr2g3365 2 47730197 47733345 Mtr4g1892 4 32067149 32069678 PCT