Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1891 ATGGATCCAAACTGTGATGAGTTTCAACAATATGAGAAACCTATAGAAGGTTATATGGCTTCAGTGACAGATTCTTCCATGGAAGACACTGATTTTTCAGAAACCATAAAGTTCATAACTCAAATCCTCATGGAAGAAAACGTTGACCAGAGACCTTTTTATGATCCACTTAGCTTACAAATCACAGAAAAATCATTCCATGATGCTCTTTCACCTAATGGCACAACCAGCACCAGTTGCAATAGTAATAGTAACAGCAGCATCGACGATTCTCACGAGTCGAAACCCTTTTCACCTGATACTCCTGTTTCTGATCTTGTTAATCATGGTTTTCAGTTTAATTCCTGTGCTTCAAGTAGTGTTAGTGATGGACCCATAAATTTCGATTCATCTATTACCAATATGTTGGCAGAGAACATTTTCAGTAATGCAGATTCTGTTTCTCAATTCAATAGAGGTTTTGAAGAAGCCAACAAGTTTCTTCCTCCTCAGCCTCAACTCTTGACTGGTTTAGAATCATCCAATTTCAATATGATGAAGAGTAGAAAGAATCACGGGCGCGAAGAAGAAGAAGGGAGTAGTAACAAGCAATCGGCTATTAGTGTTGTTGATGAGGATGAATTATCAGAAATGTTTGATAAAGCTTTGCTTAACGTGGAACGTGAATTTTTGCAGAATGAGCAACCACCTTCATCTAACGAAGGAAAGGTTCGTCCCAAGAAACGTGATAGCAAAAACAAAACGATAGACTTAAGGAATCTTCTGCTTATGTGTTCACAAGCTATGTATGCCAATGACAATAGAAATGCTAATGATCTTTTAAAGCAGATTAGGCAACATTCTTCACCCTTTGGAGAAGCATCTCAAAGGGTGGCTCATTACTTTGCCAATGGCCTTGAGGCGCGCCTTGTATGCGATAGAGCTTGTGCGCAAACATTCTATTCCTCACCTAGCACCAAGAGAATCACTGCTGCTGAGTTTTTGAAAGCATATCAAGTTCATTTTACTAGCCCTCCATTCAAGAAATTTGCATATTTGTTTGGAAATGAAATGATTATGAAAGTTGCTGCAAAAGCTGAAACCCTTCATATCATTGATTTTGGTATCCTTTATGGTTTTCAGTGGCCAATGCTTATTAAGTTTCTATCAAATAGAGAAGGTGGACCGCCAAAACTGAGGATCACTGGGATAGAATTCCCCTTACCAGGCTTTCGCCCGAAAGAAAGAATCGAGGAGACCGGTCGTCGACTTGCTAACTATTGCAAGCGTTTCAATGTTCTGTTCGAGTACAATGCCCTAGCATCGCGGAAATGGGAAACAATTCGAGTTGAAGATCTTAAAATCAAGAGCAACGAGGTAGTTGCTGTGAACTGTGTGGGGAGGTTTAAGAATTTACTAGATGAGAGTATTGAGATTAATAGTCCTAGAAACGTGGTTCTGCATTTGATTAGGAAGATAAATCCGGATATTTTCACTCTGTCTACTATTAATGGATCATATAATTCACCTTTCTTTGCTACAAGGTTTAGGGAGGCACTGTTTAATTTTTCTGCTATTTATGATATGTTGGATGCCGTCATACCGAAGGGAAGTGAATGGAGGAGGATGCTTGAGAGGGAAATTATGGGTAGGGAAGTTATGAATGTTGTAGCATGTGAAGGTTTAGAAAGAGTTGAAAGGCCAGAGACATATAAACAATGGCAGGTTAGGAATACAAGAGCTGGTTTCAAGCAACTTCCATTGGACTCGCAATTAATGGAGAAATTTAGGACTAAATTAAGGCAATGGTACCATAGAGATTTTGTATTTGATGAAGACAGCAATTGGATGCTTCAAGGTTGGAAGGGTCGTATTTTATATGCTTCAACTTGTTTGGTGCCGGCATAA 1887 0.3911 MDPNCDEFQQYEKPIEGYMASVTDSSMEDTDFSETIKFITQILMEENVDQRPFYDPLSLQITEKSFHDALSPNGTTSTSCNSNSNSSIDDSHESKPFSPDTPVSDLVNHGFQFNSCASSSVSDGPINFDSSITNMLAENIFSNADSVSQFNRGFEEANKFLPPQPQLLTGLESSNFNMMKSRKNHGREEEEGSSNKQSAISVVDEDELSEMFDKALLNVEREFLQNEQPPSSNEGKVRPKKRDSKNKTIDLRNLLLMCSQAMYANDNRNANDLLKQIRQHSSPFGEASQRVAHYFANGLEARLVCDRACAQTFYSSPSTKRITAAEFLKAYQVHFTSPPFKKFAYLFGNEMIMKVAAKAETLHIIDFGILYGFQWPMLIKFLSNREGGPPKLRITGIEFPLPGFRPKERIEETGRRLANYCKRFNVLFEYNALASRKWETIRVEDLKIKSNEVVAVNCVGRFKNLLDESIEINSPRNVVLHLIRKINPDIFTLSTINGSYNSPFFATRFREALFNFSAIYDMLDAVIPKGSEWRRMLEREIMGREVMNVVACEGLERVERPETYKQWQVRNTRAGFKQLPLDSQLMEKFRTKLRQWYHRDFVFDEDSNWMLQGWKGRILYASTCLVPA* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1891 628 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 627 IPR005202 -
Mtr4g1891 628 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 15 627 - -
Mtr4g1891 628 MobiDBLite consensus disorder prediction 181 203 - -
Mtr4g1891 628 MobiDBLite consensus disorder prediction 68 92 - -
Mtr4g1891 628 MobiDBLite consensus disorder prediction 222 244 - -
Mtr4g1891 628 ProSiteProfiles GRAS family profile. 242 626 IPR005202 -
Mtr4g1891 628 Pfam GRAS domain family 251 623 IPR005202 -
Mtr4g1891 628 MobiDBLite consensus disorder prediction 68 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1891 Mtr-Chr4 32059289 32061817 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1891 35 628 GRAS Transcription Factor Family AT1G07530 44.267 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr4g1891 GRAS 4.3e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1891 - - gmx:100795855 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1891 4 32059289 32061817 Mtr4g1891 4 32059289 32061817 ECH
Mtr2g3365 2 47730197 47733345 Mtr4g1891 4 32059289 32061817 ECH
Mtr4g1891 4 32059289 32061817 Mtr2g3363 2 47703402 47706327 PCT