Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1890 ATGGATCACACCTTTGGATTTATGGACAAACCTTTTCTTCAACCTGATCCAAACAATGCTACAGAAGAAGAAGAAGATTCACCTTTGGATGAAATTGATTTCTCTTCCACTGTTCTTCGTTACATAAACCAAATGCTTATGGAAGAAGACATGGATATGAAACCATGTATGTTTCATGATTCATTGGCTTTACAAGCTGCTGAAAAATCTTTCTATGAAGTCATTGGTCAGACTTACCCTTCTTCTTCTGTACAAAGCCCTGATGATAGTTTTAACAGTAATTTCAGTAGTAGTAATTCTGTTGAAGTTGAATCATATTTGAGTAAATTTGATGTTTCTGAGCATAATCCTTCTATATTGAAAACCCATTTTCCTGTTGATTTTGTTTTTCAAGCTAGTTCAATCAATGGTAGTAGTAATAGCAGTAGCGATTTCGGTGTAACCGGTGGTGGATTTAGGGATGGATTTCCTGATTCAAATTTGATTAGTAAGAATGAGTCTGTATTGCAATTTGAGAGGGGTGTGGAGGAAGCTAATAAGTTTCTACCTAAAGTGAATCCATTTATTATTGATTTGGAGAGTAACCCTTTTGTTCCTTCTTTTAGAAGGGAGGTTCAGGTTCAGGAGGTAGTGGTTGAGAGGGAGAGCGATGAAAGGGAACATTTTTCAGCTGAGTCGAGGGGGAGGAAGAATCATGAGCGGGGAGATGAATTGGGTTTACAAGATGAGAGAAGTAACAAGCAGTCAGCTTTTTATACTGATGATGACAGTGAGCTATCCGAGCTGTTTGATAAGGTGCTGCTTGGAACGGGGTGCAGAAAGGAAGAAAAGGCTAATGGGTCGGATATGAGTGTGCAGCAGAAAGAAGAAGCAAATAATTCTGGTGGTGGAAAAAGCCGTGGTAAGAAACAAGGCAACAAGAAGGGTGTTGTGGATTTGAGGACAATGTTGGTTCTGTGTGCTCAATATGTTTCTTCTGATGATCGTGCAAATGCTAATGAGTTATTGAGGCAGATAAGGCAGTATTCTTCTCCACTGGGTGATGGATCTCAGAGGCTGGCACATTGTTTTGCGAATGCTCTTGAAGCACGCATGGCTGGCACTGGAACTCAGATTTATACTGCTTTATACTCCAAAAGAAACTCTGCTGCCGACATGGTGAAAGCGTACCAAATGTATATTTCAGCCTGTCCATTCAAGAAGCTTGCAATCATTTTCGCGAACCATACAATTCTGAATCTAGCCAAGGAAGTAGAAACTCTTCACATTGTAGATTTTGGCATCCGTTACGGCTTTCAATGGCCTGCCCTTATTTATCGTTTATCAAAGCGACCTGGGGGGCCTCCTAAGCTGCGCTTGACAGGGATAGAACTCCCCCAACCTGGCTTCAGGCCTGCAGAGAGAGTCCAGGAGACAGGACTTCGCCTGGCAAGGTATTGTGAACGTTTTAATGTTCCGTTTGAGTTCAATGCTATTGCACAGAAATGGGAAACCATCAAAGTTGAGGACTTGAAGATAAAGAAAAATGAACTTCTTGTGGTGAATTCTGTTTGTCGGCTTAAAAATTTACTTGATGAGACAGTTGTGTTGAATAGTCCCAGGGATGCTGTTTTGAAATTAATTAGGGACACAAATCCCAATATCTTTATACATACTACTGTCAATGGGAGCTACAATGCCCCATTCTTTGCGACACGGTTCAAGGAGGCTCTTTTCAATTACTCTACAATGTTTGATGTGCTTGACATCAATGTTGCTCGTGAAGATCAAACGAGGTTGATGTTTGAGAAAGAGTTCTGGGGGAGGGAAGTAATGAATATTATAGCCTGTGAAGGTTCTCAGAGGGTTGAGAGGCCAGAGACATACAGGAAATGGCAGGTTCGGAATACAAGGGCTGGATTTAGGCATCTGCCCTTGGATAAACATCTCATTAACAAGTTAAGATGCAAGTTGAAAGACGTGTATCATAGTGATTTCATGCTTGTTGAAGATGGAAACTGCATGCTGCAAGGATGGAAGGGCCGTATAATTTACGCTTCCTCCTGCTGGGTACCTGCATAG 2061 0.4134 MDHTFGFMDKPFLQPDPNNATEEEEDSPLDEIDFSSTVLRYINQMLMEEDMDMKPCMFHDSLALQAAEKSFYEVIGQTYPSSSVQSPDDSFNSNFSSSNSVEVESYLSKFDVSEHNPSILKTHFPVDFVFQASSINGSSNSSSDFGVTGGGFRDGFPDSNLISKNESVLQFERGVEEANKFLPKVNPFIIDLESNPFVPSFRREVQVQEVVVERESDEREHFSAESRGRKNHERGDELGLQDERSNKQSAFYTDDDSELSELFDKVLLGTGCRKEEKANGSDMSVQQKEEANNSGGGKSRGKKQGNKKGVVDLRTMLVLCAQYVSSDDRANANELLRQIRQYSSPLGDGSQRLAHCFANALEARMAGTGTQIYTALYSKRNSAADMVKAYQMYISACPFKKLAIIFANHTILNLAKEVETLHIVDFGIRYGFQWPALIYRLSKRPGGPPKLRLTGIELPQPGFRPAERVQETGLRLARYCERFNVPFEFNAIAQKWETIKVEDLKIKKNELLVVNSVCRLKNLLDETVVLNSPRDAVLKLIRDTNPNIFIHTTVNGSYNAPFFATRFKEALFNYSTMFDVLDINVAREDQTRLMFEKEFWGREVMNIIACEGSQRVERPETYRKWQVRNTRAGFRHLPLDKHLINKLRCKLKDVYHSDFMLVEDGNCMLQGWKGRIIYASSCWVPA* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1890 686 MobiDBLite consensus disorder prediction 276 306 - -
Mtr4g1890 686 MobiDBLite consensus disorder prediction 212 251 - -
Mtr4g1890 686 ProSiteProfiles GRAS family profile. 304 684 IPR005202 -
Mtr4g1890 686 Pfam GRAS domain family 313 683 IPR005202 -
Mtr4g1890 686 PANTHER SCARECROW-LIKE PROTEIN 14 23 685 - -
Mtr4g1890 686 MobiDBLite consensus disorder prediction 212 253 - -
Mtr4g1890 686 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 685 IPR005202 -
Mtr4g1890 686 MobiDBLite consensus disorder prediction 1 28 - -
Mtr4g1890 686 MobiDBLite consensus disorder prediction 284 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1890 Mtr-Chr4 32053907 32056468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1890 38 686 GRAS Transcription Factor Family AT1G07530 54.971 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr4g1890 GRAS 8.3e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1890 - - mtr:MTR_4g064160 1321.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1890 4 32053907 32056468 Mtr4g1890 4 32053907 32056468 ECH
Mtr2g3364 2 47727421 47730021 Mtr4g1890 4 32053907 32056468 ECH
Mtr2g3363 2 47703402 47706327 Mtr4g1890 4 32053907 32056468 PCT
Mtr4g1890 4 32053907 32056468 Mtr2g3361 2 47676762 47678893 PCT