Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1879 ATGAAGTGCTTCCATTTCTCAAACGGATCATCCGAAAAACGAACCACAGAAGAAAACGATGAAGGTTCAGGTTCAGCTTCAGCATCAAGCTCAAGAGGCTCACGCGTCTCATGGGCGCGTTCCTTAAGCTTAATGGACACGCGCCGCTCCGAATACGATTCCGATTCTAGAGACTTCTCCGACACTCTCGGCTTCCATGAGTTTCTCTCTCAACGCCGTGCTAATCATCTTCATCTGTTTTCATTCTCTGACCTCAAAATCGCAACTCGTGGATTCAATAGAGCTTTGTTAATCGGTGAAGGTGGATTTGGTTCGGTTTATAGAGGAACCCTAATTCATCATAATCATCACCGGTCTCAAATCGATGTTGCCATCAAACAGTTGAATCGTAATGGTCATCAGGGGCATAAGGAGTGGATTAATGAAGTGAATTTATTAGGGGTGATTAAGCATCCAAATTTGGTGAGGTTAGTGGGTTATTGTGCTGAAGATGATGAAAGAGGGATTCAGAGGCTTTTGGTTTATGAGTTTATGTCTAATAAGAGTTTGGAAGATCATCTTTTGGTTCGTGTTCCTTCGTCGGTTCTTCCTTGGATTACTAGATTAAGAATTGCTCAAGATGCTGCTCGTGGGTTGGCTTATCTTCACGAGGAAATGGATTTTCAGCTAATATTTCGAGATTTCAAAACATCCAACATCTTGCTGGATGAGGACTTCAATGCAAAGCTTTCTGATTTTGGACTCGCTAGGCAAGGACCTGCAGAAGGCTTTGGCTATGTTTCTACAGCGGTTGTTGGCACCATAGGATATGCTGCACCAGAATATGTTCATACCGGAAAGCTGACTGCTAAGAGTGATGTGTGGAGCTTTGGTGTAGTTCTTTATGAGCTTATCACTGGGAGGAGAGCCGTAGAAAGAAACCTACCAAAAAACGAACAAAAACTTCTGGATTGGGTAAGACCTTATGTATCTGATCCAAAGAAGTTCCATCATATTGTCGATCCTCGACTTGAGGCACAAGATTGCATCAAATCAGCTCATAAACTTGCAGTCCTAGCAAACAAGTGTCTCATGAAGCAGCCAAAGTCTCGCCCAAAAATGAGTGAGGTGGTTGAGATTCTTGGGAACATTATTGACGAGTCCGTTCCTATGGATGAATGCATTTCCGAAGCCGTTGCAGAAACAGGAGAAGCAAATGAAGTAAATTTATCTGTAGAGAATGCTGAACCTGAACCAGCTAAACAGGGGAATAATTATCTGAAGAAGGTTTTTGAATTCAGAGACAAGGTGAGTTTAAGAAATAAATCCATTGGAAGATTTGATTGGAAAAGTTGGGCTCCTGGGCTTGTAAGAACATGGTGA 1362 0.4244 MKCFHFSNGSSEKRTTEENDEGSGSASASSSRGSRVSWARSLSLMDTRRSEYDSDSRDFSDTLGFHEFLSQRRANHLHLFSFSDLKIATRGFNRALLIGEGGFGSVYRGTLIHHNHHRSQIDVAIKQLNRNGHQGHKEWINEVNLLGVIKHPNLVRLVGYCAEDDERGIQRLLVYEFMSNKSLEDHLLVRVPSSVLPWITRLRIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDFNAKLSDFGLARQGPAEGFGYVSTAVVGTIGYAAPEYVHTGKLTAKSDVWSFGVVLYELITGRRAVERNLPKNEQKLLDWVRPYVSDPKKFHHIVDPRLEAQDCIKSAHKLAVLANKCLMKQPKSRPKMSEVVEILGNIIDESVPMDECISEAVAETGEANEVNLSVENAEPEPAKQGNNYLKKVFEFRDKVSLRNKSIGRFDWKSWAPGLVRTW* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1879 453 Gene3D Phosphorylase Kinase; domain 1 72 177 - -
Mtr4g1879 453 MobiDBLite consensus disorder prediction 1 35 - -
Mtr4g1879 453 SUPERFAMILY Protein kinase-like (PK-like) 73 374 IPR011009 -
Mtr4g1879 453 Pfam Protein tyrosine and serine/threonine kinase 98 374 IPR001245 GO:0004672|GO:0006468
Mtr4g1879 453 PANTHER OS01G0588500 PROTEIN-RELATED 41 395 - -
Mtr4g1879 453 MobiDBLite consensus disorder prediction 21 35 - -
Mtr4g1879 453 Gene3D Transferase(Phosphotransferase) domain 1 178 394 - -
Mtr4g1879 453 ProSiteProfiles Protein kinase domain profile. 92 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1879 453 CDD STKc_IRAK 98 377 - -
Mtr4g1879 453 ProSitePatterns Protein kinases ATP-binding region signature. 98 126 IPR017441 GO:0005524
Mtr4g1879 453 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 41 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1879 Mtr-Chr4 31972398 31975175 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1879 80 375 Glycoside Hydrolase AT3G07070 51.852 4.41e-98 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr4g1879 PK_Tyr_Ser-Thr 3.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1879 - - gmx:100811825 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1879 4 31972398 31975175 Mtr4g1879 4 31972398 31975175 ECH