Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1878 ATGGGAATTAATATTGTCTCTGCCATGGGAGTTTGTTTGGGCGGCCAAATCAAAGCTGAAGGTCCAACTAATTCAGTTTCAGGGTTAAGTTCAAAGAGTGTGAATGTCAACACAGAAGATCTTAGTATTCCATGTAGCAAGGTTTCTGGCGATCTCAGTAGCTCAAGTAATACTGAGGTACCAACAGTATCGGTGCCTCAGACTGCTCGGGGTGTGGAGGAGATCTTACAATCAACCAATTTGAAGAGCTTTACTTCTACTGAACTTCAGGTTGCAACAAGAAATTTCCGTGTAGACAGTGTCTTGGGACATAGTGTTTTCAAGGGTTGGATTGATGAACACTCATCTTCTGCTGCCAAACCCGGCAAAGGCATTGCTGCTGCTGTCAAAAGACTTTATCAGGATGGCTTCAAAGGTCACAAGGAGTTGTTTGCTGAAGTGAACTCTTTAGGCCAGCTTTCTCATCCTCATCTAATCAAATTGATTGGTTATTGCCTTGAAGATGACAACAGTCTTCTTGTCTTTGAATTCATGCCTCGTGGCAACTTGGAGAATCACTTGTTCATCAGAGGCTCATATTTTCAACCTCTTTCTTGGAGCCTACGTTTGAAGGTTGCTCTTGGTGCTGCCAAAGGCCTTGCATTTCTTCACAGTACTCAAACAAAAGCAATGTACCGCGATTTCCAGACTTCAAATGTCTTGCTAGATTCCAATTATAATGCAAAACTTTCAAATTTTGGCCTGGCAAAGAACTTGTCCCTGGTTGATAAAAGTCATGTACCTACCAAGCTAACCTCTGGATATACGGCTCCGGAATACCTAGCCACAGGTAACCACACTGCTAAGAGTGATGTCTATAGTTTTGGAGTTGTACTACTAGAAATATTATCTGGGAGGAGAGTTGTTGACAAGAACAGACCAACAAGACAACACAATTTGGTGGAATGGGCAAAGCCTTATCTATCCAACAAGCATAAGATTTTGCGCGTGTTGGATAGTCGCCTTGAAGGCCAATACGAATTAGAAGATGTTTTTAAGGTTGCTATACTCTCCCTACGGTGCCTTTCAGTAGAAGCCAAGTTGAGACCAAACATGGATGAGGTTGTTACAAATTTGGAGCAGTTGCAGGTTCCTCATGTAAATGGATGCAACCAGAATCGTTTGCGTAGAAGAAGTGCTGATGATGTTGCCCGCGTTAGAACATCCACAACTTATCCCCAACGCTCTGCGTCTATACCCTGTACATGA 1248 0.4287 MGINIVSAMGVCLGGQIKAEGPTNSVSGLSSKSVNVNTEDLSIPCSKVSGDLSSSSNTEVPTVSVPQTARGVEEILQSTNLKSFTSTELQVATRNFRVDSVLGHSVFKGWIDEHSSSAAKPGKGIAAAVKRLYQDGFKGHKELFAEVNSLGQLSHPHLIKLIGYCLEDDNSLLVFEFMPRGNLENHLFIRGSYFQPLSWSLRLKVALGAAKGLAFLHSTQTKAMYRDFQTSNVLLDSNYNAKLSNFGLAKNLSLVDKSHVPTKLTSGYTAPEYLATGNHTAKSDVYSFGVVLLEILSGRRVVDKNRPTRQHNLVEWAKPYLSNKHKILRVLDSRLEGQYELEDVFKVAILSLRCLSVEAKLRPNMDEVVTNLEQLQVPHVNGCNQNRLRRRSADDVARVRTSTTYPQRSASIPCT* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1878 415 MobiDBLite consensus disorder prediction 391 415 - -
Mtr4g1878 415 PANTHER OS01G0588500 PROTEIN-RELATED 47 395 - -
Mtr4g1878 415 Gene3D Transferase(Phosphotransferase) domain 1 178 396 - -
Mtr4g1878 415 ProSiteProfiles Protein kinase domain profile. 96 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1878 415 SUPERFAMILY Protein kinase-like (PK-like) 77 377 IPR011009 -
Mtr4g1878 415 Gene3D Phosphorylase Kinase; domain 1 71 177 - -
Mtr4g1878 415 MobiDBLite consensus disorder prediction 398 415 - -
Mtr4g1878 415 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 47 395 - -
Mtr4g1878 415 Pfam Protein tyrosine and serine/threonine kinase 106 371 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1878 Mtr-Chr4 31969230 31972154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1878 47 397 Glycoside Hydrolase AT3G07070 39.130 2.48e-79 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr4g1878 PK_Tyr_Ser-Thr 8.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1878 - - mtr:MTR_4g063930 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1878 4 31969230 31972154 Mtr4g1878 4 31969230 31972154 ECH