Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1877 ATGGGAATTAGTATTGTTTCAGCCATGGGAGTGTGTTTAGGCGGCAAGGTCAAAGCTGAAAGCCCAATTAATTCAGGGTTAAGTTCGAAGGGTGTGATTGTCAATACAGAAGATCACAGTATCCCATGTTGCAAGATTTCTCATGATATCATTAGCTCAAGTAGTGAGGTATCAGCCGCTTCGGTATCGGTGCCACAGACTCTTCCGCGTGTGGGGGAGATGTTGCAATCATCCAATTTGAAGAGCTTCACTTTGACAGAACTTCAGAATGCAACTAGAAATTTTCGTGTGGACAGTGTGTTAGGAGATGGTGATTTTGGATCAGTTTTTAAGGGTTGGATTGATGAACATTCATCTTCTGCTGCAAAACCTGGCACAGGCATTGCTGTTGCTGTCAAAAGACTTCATCAAGATTGTTTCAAAGGTCACAACAAGTTCATGGCTGAAGTCAATTATCTGGGCCAGCTTTCACATCCTCATCTAGTGAAATTGATTGGTTATTGTCTTGAAGATGAAAACAGCCTTCTGATTTATGAATTTATGCCACGTGGCAGCTTGGAGAATCACTTGTTCATCAGAGGCTCATATTTTCAACCTCTTTCTTGGAGCCTACGTTTGAAGGTTGCTCTTGGTGCTGCTAAAGGCCTTACATTTCTTCGCAACGCTGAAACAAAAGGAAAATACCGCGATTTCAATACCTCAAATGTCTTGCTAGATTCAAATTATAATGCAAAACTTTCTAATTTTGGGCATTCAAAGGGCGGGTCCATGGTTGATAAAAGTCATGTCTCCACCAAGCTAACATACGGATATGCAGCTCCAGAATACCTCGCCTCCGGTAATCACACTGCTAAAAGTGATGTATATAGTTTTGGAGTTGTGCTATTGGAAATATTATCAGGGAGGAGAGTTGTTGACAAGAATAGACCACCAAGTCAACACAATTTGGTGGAATGGGCTAAGCCTTATCTAACCAACAAGCGTAAAATTTTGCGCGTGTTGGATAGCCGTCTTGAAGGCCAATATGAGTTAGAAGATGCCTATAAAGTTGCTACACTATCCCTAAGGTGCCTTTCAATAGAAGCCAAGTTGAGACCAAACATGGATGAGGTTGTTACGGATTTGGAGAAGTTGCAGGTTCAAGATGTAAATGGCTGCAATCAGAATCGTTCGCGTAGAAGAAGTGCTGATTATGTTACCCATTCCAGAACAACCGCAGCTTATCCACAACGCTCGGCTTCTATGTTCTGTACATGA 1257 0.42 MGISIVSAMGVCLGGKVKAESPINSGLSSKGVIVNTEDHSIPCCKISHDIISSSSEVSAASVSVPQTLPRVGEMLQSSNLKSFTLTELQNATRNFRVDSVLGDGDFGSVFKGWIDEHSSSAAKPGTGIAVAVKRLHQDCFKGHNKFMAEVNYLGQLSHPHLVKLIGYCLEDENSLLIYEFMPRGSLENHLFIRGSYFQPLSWSLRLKVALGAAKGLTFLRNAETKGKYRDFNTSNVLLDSNYNAKLSNFGHSKGGSMVDKSHVSTKLTYGYAAPEYLASGNHTAKSDVYSFGVVLLEILSGRRVVDKNRPPSQHNLVEWAKPYLTNKRKILRVLDSRLEGQYELEDAYKVATLSLRCLSIEAKLRPNMDEVVTDLEKLQVQDVNGCNQNRSRRRSADYVTHSRTTAAYPQRSASMFCT* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1877 418 Gene3D Phosphorylase Kinase; domain 1 71 180 - -
Mtr4g1877 418 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 45 399 - -
Mtr4g1877 418 Gene3D Transferase(Phosphotransferase) domain 1 181 402 - -
Mtr4g1877 418 ProSiteProfiles Protein kinase domain profile. 95 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1877 418 Pfam Protein tyrosine and serine/threonine kinase 97 375 IPR001245 GO:0004672|GO:0006468
Mtr4g1877 418 PANTHER OS01G0588500 PROTEIN-RELATED 45 399 - -
Mtr4g1877 418 ProSitePatterns Protein kinases ATP-binding region signature. 101 133 IPR017441 GO:0005524
Mtr4g1877 418 SUPERFAMILY Protein kinase-like (PK-like) 76 380 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1877 Mtr-Chr4 31965339 31968240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1877 81 375 Glycoside Hydrolase AT3G07070 44.966 2.72e-84 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr4g1877 PK_Tyr_Ser-Thr 7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1877 - - mtr:MTR_4g063935 633.639