Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1876 ATGGGAATTAGTATTGTTTCAGCTATGGGAGTTTGTTTAGGTGGCCAAGTCAAAGCTGAAGGCCCAAAGAATTCAGTTTCAGGGTTAAGTTCAAAGAGTGTGATAGTCAATACAGAAGATCATAATATCCTATGTTACAAGGGTTCTGATGATCTCATTAGCTCAAGTAGTGAGGTATCAGCAACTTCGGTGCCACGGACACTCCCATGTGAGGGGGAGATCTTGCAATCATCCAATTTGAAGAGTTTTACTTTGACAGAACTTCAGGCTGCAACTAGAAATTTTCGTGTAGACATTGTGTTAGGAGATGGCGATTTTGGATCAGTTTTTAAGGGCCGGATTGATGAACACTCACTTTCTGCTGCCAAACCTGGCACAGGCATTGCCGTTGCTGTCAAAAGACTTAATCAAGATGGTGTCAAAAGCCACATTGAGTTGATGGCTGAAGTCAATTATCTGGGCCAGCTTACACATCCTCATCTAGTGAAATTGATTGGTTATTGTCTTGAAGATGAAAATAGCCTTTTGGTCTATGAATTTATGCCACGTGGCAGCTTGGAGAATCACTTGTTCATGAGAGGCTCATATTTTCAACCTCTTTCTTGGAGCCTACGTTTGAAGGTTGCTCTTGGTGCTGCCAAATGTCTTGCATTCCTTCACAGTGCCGAAACAAAATCGATTTACCAAAATTTGAAGACTTCAAATATCTTGCTGGATTCGAATTATAATGCGAAACTCTTTAATTTTGGGCTGGCAAAGGATGGGTCCACAGGTGATCGAAGCCGTGTCTACACCGGGCAAATCTACGGATATGCAGCTCCAGAATACCTGGCCACCGGTAATCACACTTCTAAGAGTGATGTCTATAGTTTCGGAGTTGTCATGTTGGAAATACTATCAGGTAGGAGAATTGTTGACAAGAATAGGCCACTAAGACAACATAATTTGGTGGAATGGGCTAAGCCTTGTCTATCCAACAAGCGTAAGATTTTGCACGTGTTTGATAATCGCCTTGAAGGCCAATATGAAATAGAAGACGCCTATAAGGTTGCTATACTTTCCCTACGGTGCCTTTCAATAGAAGCCAAGTTGAGACCAAACATGGATGAGGTTGTTACAAATTTGGAGCAGTTGCAAATTCCTCAAGTAAACGGATGCAACCATAATCATTTGCGTAGAAGAAGTGCTGATGATGTTACCCATGTTAGAACAGTCACAGTAAATCCACAACGTTCTGCTTCTGTGTTCTGTACATGA 1257 0.4177 MGISIVSAMGVCLGGQVKAEGPKNSVSGLSSKSVIVNTEDHNILCYKGSDDLISSSSEVSATSVPRTLPCEGEILQSSNLKSFTLTELQAATRNFRVDIVLGDGDFGSVFKGRIDEHSLSAAKPGTGIAVAVKRLNQDGVKSHIELMAEVNYLGQLTHPHLVKLIGYCLEDENSLLVYEFMPRGSLENHLFMRGSYFQPLSWSLRLKVALGAAKCLAFLHSAETKSIYQNLKTSNILLDSNYNAKLFNFGLAKDGSTGDRSRVYTGQIYGYAAPEYLATGNHTSKSDVYSFGVVMLEILSGRRIVDKNRPLRQHNLVEWAKPCLSNKRKILHVFDNRLEGQYEIEDAYKVAILSLRCLSIEAKLRPNMDEVVTNLEQLQIPQVNGCNHNHLRRRSADDVTHVRTVTVNPQRSASVFCT* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1876 418 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 44 398 - -
Mtr4g1876 418 PANTHER OS01G0588500 PROTEIN-RELATED 44 398 - -
Mtr4g1876 418 Gene3D Transferase(Phosphotransferase) domain 1 181 398 - -
Mtr4g1876 418 Pfam Protein tyrosine and serine/threonine kinase 99 374 IPR001245 GO:0004672|GO:0006468
Mtr4g1876 418 ProSitePatterns Protein kinases ATP-binding region signature. 101 133 IPR017441 GO:0005524
Mtr4g1876 418 ProSiteProfiles Protein kinase domain profile. 95 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1876 418 SUPERFAMILY Protein kinase-like (PK-like) 75 381 IPR011009 -
Mtr4g1876 418 Gene3D Phosphorylase Kinase; domain 1 69 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1876 Mtr-Chr4 31961428 31964230 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1876 73 375 Glycoside Hydrolase AT3G07070 44.118 1.38e-83 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr4g1876 PK_Tyr_Ser-Thr 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1876 - - mtr:MTR_4g063935 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3347 2 47560644 47567510 Mtr4g1876 4 31961428 31964230 PCT