Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1873 ATGGGAAACAAAATAGGAAAATTAACGGTATGTTTCACCGGAAACAACAACAGTAACCGTAAACACGACATATCCATATTAATAACGGATCCTTTAGATGAAGGACTTGGTCACTCTTTCTGTTACGTTAGACCCGACCCGACCCGTTTATCTTCTTCTAAAGTTCATTCTGAAGAAACCACAACTTTCCGAACAATCTCCGGCGCCTCCGTCAGCGCCAACACTTCAACGCCGTTATCGACGGCGTTCATGGATTTATACTCCTACGGTTGTTTTGATAGAGCTGCAGCTTTTGAAAGTTCAACTTCTTTTGCTTCTCTTCCGTTGCAACCGATTCCGAAGGCTTTTTCCGGTAACTTCGGTGGTGTTGGTGGTGGGTTTCTGAGTTCCGGTCCGTTAGAGCGTGGGTTTATGTCCGGTCCGATTGAGCGTGGGTTTATGTCTGGTCCAATTGATCGTGGTTTATTTTCCGGTCCGATTGATAAAGATAGCTCCGGCACCGGTGTTGATCAGTTTCAGAGAAGCTTCTCTCATAGTGGATTAGGGTTTTCTGTTCGACCAAGATCGAGGAAAGAAAAATGGATTCGTGTTCTTCAACGAGCGATTTCGAAGACTCTGTCACGTGGACAGGGTTCTATTGTTACTCCGATCAAAGGTGTACCGTTGAAGGAGCCACCGGAGTGGATTCTTGCCGGTGAGAAGCATAATGAGAATTTGACTGTGAGTAGTTTGAATTTGAGTAGTGAAGGTAGTTTGGAAGATGATGATTCGTTGGGAAGTCAGAATCTTCAATGGGCTCAAGGGAAAGCAGGGGAAGATCGTGTTCATGTTGTTGTTTCTGAGGAACATGGTTGGGTTTTTGTTGGGATTTATGATGGTTTTAATGGTCCTGATGCACCTGATTATTTGTTATCAAATCTTTATAGTTTTGTTCATAAGGAGCTTAAAGGATTGCTTTGGGATGATGGGGTTTCATCGGATAATTCGAATTTGAAACCGCGTGATTCGGTTGATGATGATGTTGTTGTGAAAGAGGATATGTTGTTTGATGATTGTTCTCAATGTGTTGATCAAGAGAAAGGGGAATCGATTTCGAAGAAAAAAAAGAGAGGTAAGAATTCTAAGAACAAGTACAAAGATGCCGCAAAGAAACATGAAGAGAATCAAAGGAGGTGGAAGTGTGAATGGGATAGGGAGAGATTAGAGCTTGATAGAAGATTGAAGGAGCAATTAAGTGGTGGTGACGATAATTCTGTTAATCATTCAGATGTTTTGGAAGCTCTTTCGCGAGCTTTGAGGAAAACCGAGGAGTCTTATCTTGATGTCGCGGATAAAATGGTGATGGAGAATCCGGAACTTGCTTTAATGGGTTCTTGTGTTCTTGTAATGTTGATGAAAGGGGAAGATGTTTATGTGATGAATGTGGGTGATAGTAGAGCTGTTTTGGCACAAAAAGCTGAACCTGATTATTGGATCGGGAAAATTAGACAGGATTTGGAGAGGATTAATGAAGAGACAATGCATGATCTTGAATCATGGGATGATGCTGATAAATCAAATGTTGTTCCTAGTTTAAGTGCTTTTCAGCTCACCAAGGATCATAGTACTAATGTTGAAGAGGAAGTAATCAGAATTATAAAAGAGCACCCGGATGATCCTTGTGCCGTGGTCAATGATCGTGTTAAGGGATCTCTCAAGGTTACTCGAGCATTTGGTGCCGGATTTCTCAAACAGCCGAAGTGGAACAATGCACTTCTGGAGATGTTTAGAATAGACTACGTAGGCAATTCTCCATACATCACTTGCCAACCATATCTTAAACACCACAGATTAGGCCAAAAAGACAAATTTTTGATTCTATGCTCCGACGGACTCTATCAATACTTATCAAACGAAGAAGCAGTAGCTGAAGTTGAGCTTTTCATCACATTACAACCTGAAGGAGACCCTGCTCAACATTTGGTCGAAGAAGTCTTGTTTCGCGCTGCAAAGAAAGCTGGTTTGGACTTTCACGAATTGCTCGAAATTCCACAAGGTGATAGGCGGCGTTACCACGACGATGTTTCCATCATTGTTATTTCTTTGGAAGGAAGGATATGGAGATCATGTGTTTAA 2115 0.4184 MGNKIGKLTVCFTGNNNSNRKHDISILITDPLDEGLGHSFCYVRPDPTRLSSSKVHSEETTTFRTISGASVSANTSTPLSTAFMDLYSYGCFDRAAAFESSTSFASLPLQPIPKAFSGNFGGVGGGFLSSGPLERGFMSGPIERGFMSGPIDRGLFSGPIDKDSSGTGVDQFQRSFSHSGLGFSVRPRSRKEKWIRVLQRAISKTLSRGQGSIVTPIKGVPLKEPPEWILAGEKHNENLTVSSLNLSSEGSLEDDDSLGSQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYSFVHKELKGLLWDDGVSSDNSNLKPRDSVDDDVVVKEDMLFDDCSQCVDQEKGESISKKKKRGKNSKNKYKDAAKKHEENQRRWKCEWDRERLELDRRLKEQLSGGDDNSVNHSDVLEALSRALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWIGKIRQDLERINEETMHDLESWDDADKSNVVPSLSAFQLTKDHSTNVEEEVIRIIKEHPDDPCAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYITCQPYLKHHRLGQKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1873 704 Coils Coil 368 395 - -
Mtr4g1873 704 CDD PP2Cc 403 695 IPR001932 -
Mtr4g1873 704 PANTHER PROTEIN PHOSPHATASE 2C 12 704 IPR015655 GO:0004722|GO:0006470
Mtr4g1873 704 PANTHER - 12 704 - -
Mtr4g1873 704 MobiDBLite consensus disorder prediction 360 384 - -
Mtr4g1873 704 Gene3D - 234 700 IPR036457 -
Mtr4g1873 704 Pfam Protein phosphatase 2C 371 651 IPR001932 -
Mtr4g1873 704 SUPERFAMILY PP2C-like 269 696 IPR036457 -
Mtr4g1873 704 ProSiteProfiles PPM-type phosphatase domain profile. 255 695 IPR001932 -
Mtr4g1873 704 SMART PP2C_4 256 693 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1873 Mtr-Chr4 31934594 31938144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1873 1 704 PP2C-type Phosphatase Gene Family AT1G07630 68.715 0.0 934
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1873 - - gmx:100810214 1100.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1873 4 31934594 31938144 Mtr4g1873 4 31934594 31938144 ECH