Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1863 ATGGAGGGTGAGAATAATAATGAGATGAATGAAGAGGGGTCGAATGGGAATAATAGTATTTCATCAAGTTCACGATGGAACCCAACAAAAGAACAAATAAGTATGTTGGAGAATTTGTATAAGCAAGGAATAAAGACACCAAGTGCTGAAGAAATACAAGAAATCACTGCTAGGCTTAGAGTGTATGGTCACATCGAAGGAAAGAATGTCTTTTACTGGTTTCAGAATCACAAAGCAAGACAGAGACAGAAACAGAAGCAAGAAAGTATTGCTTATTTCAATCGACTTCTTCATAGACCTCAACCCATTTATCCTTCACCTATTTGTCCAAATGGTATGTTCTCAACTTCTTCCTTTTTCTAG 363 0.3664 MEGENNNEMNEEGSNGNNSISSSSRWNPTKEQISMLENLYKQGIKTPSAEEIQEITARLRVYGHIEGKNVFYWFQNHKARQRQKQKQESIAYFNRLLHRPQPIYPSPICPNGMFSTSSFF* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1863 120 ProSiteProfiles 'Homeobox' domain profile. 19 84 IPR001356 GO:0003677
Mtr4g1863 120 CDD homeodomain 25 85 IPR001356 GO:0003677
Mtr4g1863 120 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 7 115 IPR044555 GO:0003700|GO:0099402
Mtr4g1863 120 Pfam Homeodomain 23 83 IPR001356 GO:0003677
Mtr4g1863 120 MobiDBLite consensus disorder prediction 1 28 - -
Mtr4g1863 120 SMART HOX_1 21 88 IPR001356 GO:0003677
Mtr4g1863 120 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 7 115 - -
Mtr4g1863 120 SUPERFAMILY Homeodomain-like 23 92 IPR009057 -
Mtr4g1863 120 MobiDBLite consensus disorder prediction 8 28 - -
Mtr4g1863 120 Gene3D - 23 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1863 Mtr-Chr4 31766492 31766854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1863 17 111 Wox Gene Family AT5G59340 72.632 4.86e-49 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mtr4g1863 Homeodomain 9.9e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1863 - - pvu:PHAVU_011G064900g 179.104