Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1860 ATGGCGAAGACACTGATTTCATCTCCATCATTCATCGGAACTCCACTTCCTTCACTTCACCGCAACTTCTCCCCTAACCGCACCAGACTATACACCAAAGTTCACTTCAGTTTCCACCAAATTCCTCCAATTCAATCCTTAACTCATTCTATTGATGTTGCCGGTGTCTTCGCCAGAGCTGAAGGCCTTCTTTATACGCTTGCTGATGCCGCCGTTACGGCCGATGCGGTTACTTCCACTTCCACGGATGTTACTGTGCAGAAGAACGGAGGTTGGTTTGGTTTCATCTCCGATGGTATGGAGTTTGTTCTTAAGATATTAAAGGATGGTTTGTCTGCCGTGCATGTGCCTTATTCGTATGGATTTGCTATCATATTGCTCACTCTTATTGTTAAGGCGGCTACGCTTCCTTTGACAAAGCAACAGGTTGAATCAACACTAGCTATGCAAAACCTTCAACCTAAAATTAAGGCCATTCAACAAAGATATGCTGGTAATCAGGAAAGAATACAACTTGAGACTTCAAGGCTATATACCCAAGCTGGGGTTAACCCATTGGCAGGTTGTTTACCGACTTTGGCTACTATTCCCGTCTGGATTGGTCTATACCAAGCTTTATCTAATGTGGCAAATGAGGGACTGTTAACAGAAGGTTTCTTATGGATCCCTTCTCTCGGTGGTCCCACTAGCATTGCTGCTAGACAAAGTGGATCTGGAATTTCTTGGCTTTTTCCATTTGTGGATGGCCATCCACCTTTGGGTTGGTATGACACTGCAGCGTATCTTGTTTTACCTGTTCTTCTTATTCTTTCTCAATATGTTTCAATGGAAATCATGAAACCACCTCAGACAAATGATCCTACTCAAAAGAATACACTTCTTATTTTCAAGTTTCTTCCACTCATGATTGGCTACTTCTCACTATCTGTGCCATCAGGACTAACAATTTACTGGTTTACGAATAATGTCCTGAGCACAGCTCAACAAATATGGTTGCGCAAATTAGGAGGTGCGAAGCCTGCTGTTAATGAAGATGCTGGTGGAATTATTACGGCAGGACGAGCTAAGAGATCATTTTCTAAGCCCGAAAAGGATGGTGAAAGGTTTACGCAGTTAAAAGAAGAGGAGAGGAAGAAAAAGTTAAGCAAGGCACTGCCCGCGGATGAAGTTCAACCTCTGGCCTCGGCTTCTGTTTCTGATGATGGCTCGGATGTAAAAAACGAGAAGGAACAAGAAGTTACCGAAGAGGCGTATGCATCCAAAGTTCCCCAAGAGGTTCAAAGTTTTTCTAGGGGAAGAAGAAGCAAGCGTTCAAAGCAAAAGCCTGTTGTATGA 1335 0.4337 MAKTLISSPSFIGTPLPSLHRNFSPNRTRLYTKVHFSFHQIPPIQSLTHSIDVAGVFARAEGLLYTLADAAVTADAVTSTSTDVTVQKNGGWFGFISDGMEFVLKILKDGLSAVHVPYSYGFAIILLTLIVKAATLPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWYDTAAYLVLPVLLILSQYVSMEIMKPPQTNDPTQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQIWLRKLGGAKPAVNEDAGGIITAGRAKRSFSKPEKDGERFTQLKEEERKKKLSKALPADEVQPLASASVSDDGSDVKNEKEQEVTEEAYASKVPQEVQSFSRGRRSKRSKQKPVV* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1860 444 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 438 - -
Mtr4g1860 444 Pfam 60Kd inner membrane protein 120 334 IPR001708 GO:0016021|GO:0032977
Mtr4g1860 444 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 119 333 IPR028055 -
Mtr4g1860 444 MobiDBLite consensus disorder prediction 375 444 - -
Mtr4g1860 444 MobiDBLite consensus disorder prediction 402 416 - -
Mtr4g1860 444 PANTHER OXA1 1 438 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1860 Mtr-Chr4 31728103 31733604 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1860 23 390 Chloroplast and Mitochondria Gene Families AT2G28800 70.430 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1860 K03217 - gmx:100817173 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1860 4 31728103 31733604 Mtr4g1860 4 31728103 31733604 ECH