Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1842 ATGTCTTTACAAAACAAGGGATTCTGGATGGTCAAAGGATCTGGGCATGTTAGTGACAGAGAGCCGGCATTTGATAATCCTTCCAAAATTGAACCAAAACGACCTCATCAATGGTTAATTGATGCAACTGAAGGGGATTTTTTGCCAAACAAGAAGCAAGCAATAGAAGATGCAAATGAAAGATCTAGTTCAGGATTTTCAAATGTAAATTTTACTCCATGGGAGAACAATCACAATTTTCATTCAGACCCAAGCCACCAAAATCAATTAATTGATCGATTATTTGGGTCTGAAACCAGGCCTGTCAATTTCACTGAAAAAAATACCTACGTTTCGGGCGATGGTTCTGATGTGAGATCAAAGATGATCGCCAATCATTATGGAGATGGTGCATCTTTTGGCTTGTCTATATCTCATTCTACTGAAGATTCTGAACCATGTATGAATTTTGGGGGAATCAAGAAAGTCAAAGTAAATCAGGTTAATCCTAGTGATGTGCAAGCTCCAGAGCAACATAATTTTGACAGGCAGAGTACGGGTGATCTACATCATGTCTATCATGGGGAAGTTGAGACGAGATCTGGATCAATAGGACTTGCCTATGGCAGTGGGGATGCCCGTATCAGACCGTTTGGCACCCCTTATGGCAAAGTAGATAACACAGTCCTATCCATTGCTGAATCTTATAATAAAGACGAGACTAATATAATTTCTTTTGGTGGGTTCCCAGATGAACGGGGTGTTATCTCTGTGGGCAGGGCTGCCACAGACTATGAACAGTTATATAATCAATCATCAGTTCATGTGTCAACAACAGCTCATGAGAAAGAGTTGGAGGCATCAAATTCTGATGTAGTTGCAAGTACTCCTTTGGTGACAACAAAAAAACCTGAATCTGTGTCCAAGAATAAACAAGATATCAAATCAACAAGGAAAGAATCTCCAAACACCTTCCCTACTAATGTCAGGAGCTTGATATCTACTGGTATGCTAGATGGTGTTCCTGTGAAGTATGTCTCGGTGGCGCGGGAGGAACTTCGTGGAATTATAAAAGGAACTACCTATCTTTGTGGGTGTCAGTCATGTAACTATGCCAAGGGTCTGAATGCTTTCGAGTTTGAAAAGCATGCTGGTTGCAAATCAAAACATCCAAACAATCACATTTATTTTGAGAATGGGAAGACCATTTATCAAATAGTACAGGAATTGAGGAGTACCCCTGAAAGTTCATTGTTTGACACAATCCAAACAATTTTTGGTGCACCAATAAATCAGAAAGCATTTCGCATTTGGAAAGAATCATTTCAAGCAGCAACACGCGAGCTTCAACGGATTTATGGAAATGAAAAACGTAACCTCTAA 1362 0.3987 MSLQNKGFWMVKGSGHVSDREPAFDNPSKIEPKRPHQWLIDATEGDFLPNKKQAIEDANERSSSGFSNVNFTPWENNHNFHSDPSHQNQLIDRLFGSETRPVNFTEKNTYVSGDGSDVRSKMIANHYGDGASFGLSISHSTEDSEPCMNFGGIKKVKVNQVNPSDVQAPEQHNFDRQSTGDLHHVYHGEVETRSGSIGLAYGSGDARIRPFGTPYGKVDNTVLSIAESYNKDETNIISFGGFPDERGVISVGRAATDYEQLYNQSSVHVSTTAHEKELEASNSDVVASTPLVTTKKPESVSKNKQDIKSTRKESPNTFPTNVRSLISTGMLDGVPVKYVSVAREELRGIIKGTTYLCGCQSCNYAKGLNAFEFEKHAGCKSKHPNNHIYFENGKTIYQIVQELRSTPESSLFDTIQTIFGAPINQKAFRIWKESFQAATRELQRIYGNEKRNL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1842 453 MobiDBLite consensus disorder prediction 278 319 - -
Mtr4g1842 453 MobiDBLite consensus disorder prediction 14 35 - -
Mtr4g1842 453 Pfam Tify domain binding domain 348 403 IPR032308 -
Mtr4g1842 453 MobiDBLite consensus disorder prediction 18 35 - -
Mtr4g1842 453 PANTHER DNA-BINDING PROTEIN 1 453 - -
Mtr4g1842 453 PANTHER AUTOIMMUNE REGULATOR 1 453 - -
Mtr4g1842 453 MobiDBLite consensus disorder prediction 282 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1842 Mtr-Chr4 31527056 31531759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1842 268 436 PHD Transcription Factor Family AT3G53680 41.808 4.57e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1842 - - gmx:100802229 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1842 4 31527056 31531759 Mtr4g1842 4 31527056 31531759 ECH