Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1839 ATGCCGATTTCTAGAATTGCAATTGGAAATCCTTCTGAGTTTGGCAAAGCTGATGCACTTAAGGCTGCACTTGCTGAGTTCATTTCAATGCTCATTTTTGTCTTTGCAGGGGAAGGCTCTGGCATGGCATATAATAAGCTTACAAACAATGGTGCAGCAACACCAGCAGGGTTGGTAGCTGCATCACTATCACATGCATTTGCACTTTTTGTTGCTGTCTCTGTTGGTGCTAACATTTCTGGTGGACATGTCAACCCTGCTGTCACTTTTGGTGCATTCATTGGTGGACACATTACACTCATTAGAGGCCTTTTGTATTGGATTGCTCAGTTGCTTGGTTCTGTTGTTGCTTGCTTGCTCCTTAAAATTGCCACTGGTGGACTGGAAACATCTGCATTCTCATTGTCTTCTGGTGTGGGAGCAACAAATGCACTTGTGTTTGAGATTGTGATGACTTTTGGTTTGGTTTACACAGTGTATGCTACTGCAGTAGACCCAAAAAATGGTAGCCTAGGAACAATTGCTCCAATTGCAATTGGTTTCATAGTTGGAGCTAACATCTTAGCAGGTGGTGCATTTGATGGTGCATCCATGAACCCAGCAGTTTCTTTTGGGCCTGCTGTTGTTAGCTGGACATGGGCTAATCATTGGGTCTATTGGGTCGGCCCGTTGATCGGTTCTGCTATTGCTGCAGTCGTTTACGAGACTTTCTTTATCACCCCTAGCTCTTATGAACAGTTACCTGTCACGGATTATTAA 759 0.4401 MPISRIAIGNPSEFGKADALKAALAEFISMLIFVFAGEGSGMAYNKLTNNGAATPAGLVAASLSHAFALFVAVSVGANISGGHVNPAVTFGAFIGGHITLIRGLLYWIAQLLGSVVACLLLKIATGGLETSAFSLSSGVGATNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWANHWVYWVGPLIGSAIAAVVYETFFITPSSYEQLPVTDY* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1839 252 Pfam Major intrinsic protein 16 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1839 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Mtr4g1839 252 PANTHER AQUAPORIN-8 1 252 IPR034294 -
Mtr4g1839 252 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 1 252 - -
Mtr4g1839 252 SUPERFAMILY Aquaporin-like 18 243 IPR023271 -
Mtr4g1839 252 CDD MIP 26 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1839 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Mtr4g1839 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1839 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1839 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1839 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1839 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1839 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1839 Mtr-Chr4 31489540 31491491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1839 1 252 Major Intrinsic Protein MIP AT2G36830 80.159 2.71e-143 399
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1839 4 31489540 31491491 Mtr4g1839 4 31489540 31491491 ECH