Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1821 ATGCCTAGAAAAGGAATGAGAAGCATTTTCTTCCATCCAACACCTCCTTCATCATCAACATTACCATCACCTTCCTCACCTCACCACACTTTCACTTTCTCAGACTCCTTAATGGAAGAAAATATCTTAACTGCAGAATCACTTATAACCAAATGGGATTATTCCAACACAAACCAAATTATCAACCCACTTTTCAGCGGTAATACTCGCTTTGAAGCCAAACACTACCTTAACGCTGTCAAGGGTTTACAATCTGCTATGCAATATTTTGTCACACATGATTCCACCTCCAACACTCTTGTTAGAGCTCAATTTTTAATGCAACTTGCTATGAAAACTCTTCAAAAAGAGTTTTATAACATACTTTCAACAAATAGAGAACATTTAGACCCTGAATCTGTTTCTAACCGTTCCTCCACCGATCGTCGAAGCAGTTTCTCCGTTTCTGATTATGATGATGAAGTTTCCGACGACGAGAAGTTTGTTGTCGGAAACCAAATCTCGGAAACGGAGAGAGTTTCGATGCTTGCTATGGCGGATTTGAAAGCTATTGCTGATTGCATGATAAATTGTGGGTATGGAAAAGAGTGTGTTAAGGTTTACATTGTTATGAGAAAATCTATTGTTGATGAAGCACTTTATCATCTTGGTATTGAAAGATTAACGTTCTCTCAAATTCAAAAAATGGATTGGGAAGTCATTGAGTTGAAAATCAAGACGTGGTTGAAGGCTGTTAAAGTCGCCGTGAGAACACTTTTCCACGGCGAAAGAATTCTATGCGACGACGTATTCGCCGCCGCAGGGAAGAGAATAGCTGAGTCTTGTTTCGCAGAGATTACCAAAGAAGGTGCTACATCTCTTTTTACTTTTCCGGACATGGTAGCAAAATGCAAGAAAACTCCTGAGAAAATGTTCAGAACTCTTGATTTATACGAAGCAATTTCAGATCATTTTCAACAAATTCAATCGATTTTCTCGTTTGAATCAACTTCCAACGTCCGTTTACAAGCCATTAATTCAATGGAGAAACTTGCAGAAGCTGTTAAAACGATGTTAAAGGAATTCGAATCAGCTATTCAGAAAGATTCTTCAAAGAAACAAGTCTCCGGTGGTGGTGTTCATCCTCTCACACGCTATGTCATGAATTACCTAACCTTCCTCGCCGATTACGGTGGAATTCTCGCTGATATCGTCTTCGATATGCCGCAGTCTCCGTTACCGGAGTCGTACTATCGAAGTCCGATGCGCAGCGAGAATTCATCGTCATCCTCGTCATCATCATCTTCATCGGAGATATCAGAAAAAATCGCGTGGCTGATACTTGTTCTTCTCTGCAAACTCGATACAAAAGCTGAATTCTACAAAGACGTAGCACTTTCTTATCTTTTTCTCGCAAATAACATGCAATACGTCGTCGTAAAGGTTCGAAGATCGAATCTAGGGTTTCTTCTCGGAGAAGAATGGTTAACAAATCATGAATTGAAGGTGAAAGAGTATGTGAACAAATTTGTTCAAATTGGATGGAATAAGGTTTTGTCAACGTTGCCGGAAAATGAAAATTCCACGGCGGAGAAGACGGTGGAGCAAGTTAAGGCTATTTTTGTAAAATTCAATGCTGCGTTTGATGAAGAGTGTAAGAAACAAACTTCATGGATTGTATCCGACCCGAGGCTAAGGGATGAGATTAAAGCGTTGATTGGTTCGAAGTTGGTGGCGAAGTATGGTGGATTCTATGAGAAGAATCGGGTCGGGTCCGGTGTAAGATATGAACCGGAATATATAGAGAGTTATCTGGGTAATATTTTGTATGGGGTTGTTGGTGGAGATTCGGGGAGTGTTTCGTCATATTCTTATTCGACGACATCGTCTTCCGTTAGCTCTATTCGCCCGTGA 1893 0.4031 MPRKGMRSIFFHPTPPSSSTLPSPSSPHHTFTFSDSLMEENILTAESLITKWDYSNTNQIINPLFSGNTRFEAKHYLNAVKGLQSAMQYFVTHDSTSNTLVRAQFLMQLAMKTLQKEFYNILSTNREHLDPESVSNRSSTDRRSSFSVSDYDDEVSDDEKFVVGNQISETERVSMLAMADLKAIADCMINCGYGKECVKVYIVMRKSIVDEALYHLGIERLTFSQIQKMDWEVIELKIKTWLKAVKVAVRTLFHGERILCDDVFAAAGKRIAESCFAEITKEGATSLFTFPDMVAKCKKTPEKMFRTLDLYEAISDHFQQIQSIFSFESTSNVRLQAINSMEKLAEAVKTMLKEFESAIQKDSSKKQVSGGGVHPLTRYVMNYLTFLADYGGILADIVFDMPQSPLPESYYRSPMRSENSSSSSSSSSSSEISEKIAWLILVLLCKLDTKAEFYKDVALSYLFLANNMQYVVVKVRRSNLGFLLGEEWLTNHELKVKEYVNKFVQIGWNKVLSTLPENENSTAEKTVEQVKAIFVKFNAAFDEECKKQTSWIVSDPRLRDEIKALIGSKLVAKYGGFYEKNRVGSGVRYEPEYIESYLGNILYGVVGGDSGSVSSYSYSTTSSSVSSIRP* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1821 630 Gene3D Exocyst complex component Exo70 48 605 - -
Mtr4g1821 630 Coils Coil 338 361 - -
Mtr4g1821 630 MobiDBLite consensus disorder prediction 130 151 - -
Mtr4g1821 630 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 23 608 - -
Mtr4g1821 630 SUPERFAMILY Cullin repeat-like 57 600 IPR016159 -
Mtr4g1821 630 MobiDBLite consensus disorder prediction 1 27 - -
Mtr4g1821 630 Pfam Exo70 exocyst complex subunit 240 598 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr4g1821 630 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 608 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1821 Mtr-Chr4 31292087 31294246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1821 22 604 EXO70 exocyst subunit family AT5G59730 47.855 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1821 K07195 - gmx:100810579 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1821 4 31292087 31294246 Mtr4g1821 4 31292087 31294246 ECH