Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1809 ATGGATAACAAGCAGAATGCCACCACCACCATTTCTACCACTGCAAGTAACACCGAGAATCCCACCACCCCCGCCGCCACCACTGCTCCCACTTCCCCAAGGAGCACCCATAATCCCACCACCACCGGAAAGGAAAAGGAAAAAATTGAATCCGAAGTGAATAAGAAAAAAGAGGATTCTGCGTCTACAGAAATTGTGATAAGAAATGAGGTGATACGGAAATTCAGTTTTGATGATCTTAATGATGCAACTGAAGGTTTCAAGATTAGGTACTTTGCGGGTCAAGGAGGTTTTGGCAAGGTTTACAAAGGGTTGCTTCCAACAAAACAGGTTGTAGCTATAAAGCGACTTGACTCAAATAGTGAAGAAAAAGCTGAGGAGTTTAAGACTGAAGTGGAGACATTGAGTAATGCAAGCCACCAAAATATTGTCCAATTGATTGGATACTGTAATGAGAATGAGCACAAGCTATTAGTTTATGAGTACATGAAGTTGGGATCTTTGGATGATCATTTGTTTGGTCGTAAGCGAGGTAATCTTGATTGGGATGCAAGAATGAAAATAGCAGCTGAAATAGCAAAGGGTGTGGAGTATCTACATGTTAAAATGAATCCTCCTATGATATACTGTGACCTAAAAAGCGCAAATGTTTTGTTAGGCGATGGATATGATGTAAAGTTATCTGATTTTGGGTATGCTAAAGTAGGCCCAGAACATGAATCAGGAGTGGTTTATGGCTCATATGGATATTGTGATCCATGTTATGGAGAAACAGGTACTGTGTCATTCGAATCAGATATTTACAGCTTTGGAGTTGTTCTTTTGGAGCTCATCAGTGGTAGAAGAGCTATTGATGATACAAGACTTGGTGATGATCAAAATGTTGTTTTCTGGGCAAGTTCTGTATTCAAAGATATGAACAAATTCAAAGATATTGTTGACCCATTGCTAGAAGGTAAATATCATGAGGGAGATTTACCGAAAGTTGTAGGCATTGCTGCAAGATGTGTTCAAAAAAAAGTTCATCGTAGGCCCAATATAAGTCAAATTCGGAGTAGTTCGACCCTTTAA 1071 0.3959 MDNKQNATTTISTTASNTENPTTPAATTAPTSPRSTHNPTTTGKEKEKIESEVNKKKEDSASTEIVIRNEVIRKFSFDDLNDATEGFKIRYFAGQGGFGKVYKGLLPTKQVVAIKRLDSNSEEKAEEFKTEVETLSNASHQNIVQLIGYCNENEHKLLVYEYMKLGSLDDHLFGRKRGNLDWDARMKIAAEIAKGVEYLHVKMNPPMIYCDLKSANVLLGDGYDVKLSDFGYAKVGPEHESGVVYGSYGYCDPCYGETGTVSFESDIYSFGVVLLELISGRRAIDDTRLGDDQNVVFWASSVFKDMNKFKDIVDPLLEGKYHEGDLPKVVGIAARCVQKKVHRRPNISQIRSSSTL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1809 356 PANTHER SERINE/THREONINE-PROTEIN KINASE CDG1 37 352 - -
Mtr4g1809 356 Pfam Protein kinase domain 94 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1809 356 MobiDBLite consensus disorder prediction 40 61 - -
Mtr4g1809 356 SMART serkin_6 87 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1809 356 Gene3D Phosphorylase Kinase; domain 1 46 162 - -
Mtr4g1809 356 PANTHER OS07G0668900 PROTEIN 37 352 - -
Mtr4g1809 356 Gene3D Transferase(Phosphotransferase) domain 1 163 355 - -
Mtr4g1809 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Mtr4g1809 356 SUPERFAMILY Protein kinase-like (PK-like) 67 352 IPR011009 -
Mtr4g1809 356 MobiDBLite consensus disorder prediction 1 61 - -
Mtr4g1809 356 ProSiteProfiles Protein kinase domain profile. 87 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1809 356 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1809 Mtr-Chr4 31134167 31136249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1809 38 350 Glycoside Hydrolase AT3G07070 46.914 8.29e-96 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mtr4g1809 Pkinase 5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1809 - - mtr:MTR_4g061860 680.633