Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1807 ATGTGGAATTGTAGAGAAGATTGGTTAATTATATTCATCTATGTCTTATCAGTTTTTCCTTTGGTATGTTTTTCTGCAAACTTTGTTCCTATAGATAATTATCTTATAGATTGTGGATCACATACAAATACTTCAATAGGTAGTAACCTCAATTTCACATCAGATACTTTCTTTAAGAATTTCCTTTCAACACAAGAAGATATTCTTGCAAATACCACCTTGAAATCAATCAACTCCACCACTGATTTTTCACCTCTTTATCAAACTGCAAGAATCTTCATTTCATCTTCAAAGTACACATTTCCTATTAACAAAAAGGGTAGGCATTGGATCCGTCTTTATTTCTTTCCATTTTCGTATCAAAATTACAATCTTAGTGCTGCAAATTTTGCTGTTACCACAGAACATAATATCCTTCTTAGTAGCTTTAGTGTGCCGAAAAAAAATCCTGTTATGAAGGAGTACTTGGTAAATGTGACCTTAGACACACTTGTCATCACCTTTACCCCATCGAACAATTCCACTGCTTTTGTGAATGCTATTGAAGTTGTTTCTGTGCCTGACGACCTAATTGCCGATGATGCTATCGCCTTGAATCCGCGAAGAGAGTACACAGGGTTGTTGACAGATGCATTTGAGACGGTTTTTAGGCTTAACATGGGTGGTCCAAGTGTTTCCTCTAGTGTTGACCCGCTTCATCGAACTTGGGTTCCAGATACAAGCTTCCTGATACAACCTAACCTTGCTACTAATTTTTCAAGTATAGGTGCTGTTAAATATGCAAAGGGGGGTGCAACAGAAAATATTGCTCCACCTAGTGTCTATGGTACTTTAACCGAGATGAACTCGGATGGTGATCCGCGTAGTAATTTCAATGTAACATGGAAGTTTGATGTCGAACCAGGATTTCAATACCTTGTTCGACTTCATTTCTGTGACATTGTCAGTAAAGGTCTTAATGAACTTTATTTCAATGTTTACATTACTTCCTTGTTGGCTGCCAAGGATCTTGATATCGGTGAAAAGACTCATAATACTTTGGCTACTCCGTATTTTATGGATTTTGTTACGACACCGTCAGTTGACAATAAAATTCTTGTAAGTATTGGCCCTTCTGATGTCAATAGTGATTACCCTAATGCAATTTTGAATGGACTTGAGATCATGAAAATGAACAACTCTATCAGCAGTCTCAGCGCATCTGCAGCCGTGTCTTTGCCGAGTAGTCATGGTTCAAAATCTAAGAAAGTTGGTGTGATAGTGGGTGTTAGTCTTGGGATATTTTGCGCACTGGTGGCCATGGTTGGAGGTTTCTTTGTACTCAGAAAGAGAAGAAGACAGTTGGCACAACAAGGGGATTCAAAGACATGGGTTCCTTTATCGGATGGAACTTCTCACACAATGGGAAGTAAATATTCAAACGCCACAACAGCCAGTGCTGCTTCAAATTTCGGGTATCGCTTTCCTTTTGCGGTAGTTCAGGAGGCAACAAACAATTTTGATGAGAGTTGGGTTATCGGCGTAGGTGGTTTTGGTAAGGTATACAAAGGTGAATTAAGCGATGGAACTAAAGTTGCTTGTAAGAGGGGGAACCCTCGGTCGCATCAGGGACTTGCAGAGTTCCGAACTGAAATTGAAATGTTGTCTCAGTTCCGTCATCGACATCTAGTATCATTAATTGGATATTGTGACGAAAGGAATGAAATGATCTTGATATATGAATACATGGAGAACGGAACTGTCAAGAGTCATCTGTATGGTTCAGGTCTCCCTAGCTTAAGTTGGAAGGAACGACTTGAGATATGCATTGGAGCAGCTAGGGGGCTCCATTACCTTCATACCGGCTATGCTAAAGCAGTTATTCATCGTGATGTAAAGTCTGCAAATATCCTACTTGATGAGAACCTCATGGCAAAAGTAGCCGATTTCGGGCTATCAAAGACCGGACCGGAGATTGATCAAACGCATGTGAGCACAGCTGTCAAAGGGAGTTTCGGCTACCTTGATCCGGAATATTTCAGAAGGCAACAACTAACAGAAAAATCGGACGTGTATTCATTTGGGGTAGTTCTGCTTGAGGTTCTGTGTGCAAGACCTGTTATAGATCCATCCCTTCCACGAGAAAGGGTGAACTTGGCAGAATGGGCGATGAAATGGCAGAAAAAAGGGGAACTTGCGCGAATCGTGGATCCAACACTTGCTGGGAAAATAAGACCGGATTCTCTAAGAAAGTTTGCAGAAACTGCTGAAAAATGTTTGGCTGATTTTGGTGTTGATAGGCCTTCCATGGGAGATGTATTGTGGAATTTGGAGTATGCTCTTCAACTTCAAGAGGCTGTTGTTAAAGGAGATCCTGAAGAAAACAGTACTAATATGATCGGCGAACTCTGTCCGCAAATCAACAATTTCGAGCAGGAACCGAGTGTTTCTGTTGAGCAATCTGAAGCTTCCAGTTTAGATGATCTTTCAGGCGTTTCTATGAGTAAAGTATTCTCGCAGCTGGTGAAGTCTGAGGGAAGGTGA 2523 0.4071 MWNCREDWLIIFIYVLSVFPLVCFSANFVPIDNYLIDCGSHTNTSIGSNLNFTSDTFFKNFLSTQEDILANTTLKSINSTTDFSPLYQTARIFISSSKYTFPINKKGRHWIRLYFFPFSYQNYNLSAANFAVTTEHNILLSSFSVPKKNPVMKEYLVNVTLDTLVITFTPSNNSTAFVNAIEVVSVPDDLIADDAIALNPRREYTGLLTDAFETVFRLNMGGPSVSSSVDPLHRTWVPDTSFLIQPNLATNFSSIGAVKYAKGGATENIAPPSVYGTLTEMNSDGDPRSNFNVTWKFDVEPGFQYLVRLHFCDIVSKGLNELYFNVYITSLLAAKDLDIGEKTHNTLATPYFMDFVTTPSVDNKILVSIGPSDVNSDYPNAILNGLEIMKMNNSISSLSASAAVSLPSSHGSKSKKVGVIVGVSLGIFCALVAMVGGFFVLRKRRRQLAQQGDSKTWVPLSDGTSHTMGSKYSNATTASAASNFGYRFPFAVVQEATNNFDESWVIGVGGFGKVYKGELSDGTKVACKRGNPRSHQGLAEFRTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMENGTVKSHLYGSGLPSLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEVLCARPVIDPSLPRERVNLAEWAMKWQKKGELARIVDPTLAGKIRPDSLRKFAETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVKGDPEENSTNMIGELCPQINNFEQEPSVSVEQSEASSLDDLSGVSMSKVFSQLVKSEGR* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1807 840 Pfam Malectin-like domain 36 391 IPR024788 -
Mtr4g1807 840 ProSiteProfiles Protein kinase domain profile. 500 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1807 840 Gene3D Phosphorylase Kinase; domain 1 462 575 - -
Mtr4g1807 840 PANTHER OS07G0166700 PROTEIN 20 812 IPR045272 GO:0004714|GO:0006468
Mtr4g1807 840 Pfam Protein tyrosine and serine/threonine kinase 505 697 IPR001245 GO:0004672|GO:0006468
Mtr4g1807 840 SUPERFAMILY Protein kinase-like (PK-like) 477 771 IPR011009 -
Mtr4g1807 840 PANTHER RECEPTOR-LIKE PROTEIN KINASE HERK 1 20 812 - -
Mtr4g1807 840 Gene3D Transferase(Phosphotransferase) domain 1 576 793 - -
Mtr4g1807 840 CDD STKc_IRAK 506 771 - -
Mtr4g1807 840 Gene3D - 33 187 - -
Mtr4g1807 840 Gene3D - 211 393 - -
Mtr4g1807 840 SMART serkin_6 500 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1807 840 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Mtr4g1807 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1807 Mtr-Chr4 31110035 31113389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1807 12 840 Receptor kinase-like Gene Family AT3G46290 65.233 0.0 1072
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mtr4g1807 Malectin_like 1.2e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1807 - - gmx:100806488 1301.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1807 4 31110035 31113389 Mtr4g1807 4 31110035 31113389 ECH
Mtr2g3308 2 47153167 47156650 Mtr4g1807 4 31110035 31113389 ECH
Mtr2g3308 2 47153167 47156650 Mtr4g1807 4 31110035 31113389 PCT