Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1805 ATGTATACAAACTTCAACATCACATTCTCCACCACACCTGATCTGCAGCAGCACAACCACCTCGGTGAGTACGAGTCGGTCCCACAGCTCAACTCTAGTGGTGGTGGTGGTGGTGGAGGAAATTATAATAGCTGTAGCAGCGGGTGTGCTAGCTACCTGGGGTCGCCGGACAGATTGATGCAGAGAAGCATTAGTAGCCACTCTCTGCAAAAGAATGATGTGCCACACCACCACCCTTTTTCTACTTTGTTTGCTGAATTGCTTGATCAGGAAAATGGTCCGGTGCGGCGAGTTTACAGTACTGGTGATCTTGATCAGAGAGTTGGTGGAATGCAACAATATTATCATCAATCGGATAGTCCTTTGTCAACAGAGAGTAACATGATAATAGAAGAAATGAGCAGACCAGCCAGTCCTTACAGCCCAGAGGAAAAGAAGGTGAGGATTGAGAGATATAGAAGCAAGAAAAATCAGAGGAACTACAATAAGAAAATTAAGTATGTTTGTAGGAAGACATTGGCAGACAGTAGGCCACGTATTAGAGGGAGATTTGCTAAGAATGATGAAATTGTAAGGAATCCACCAAATCAATGGAGCCATATTAGTAATGGAGAAGAATTGGAAGATGAGGAAGAAGAAAATTGGGACAGTTTATTTGATTCATTGGTTCCTACTTCAAATCTTGCTCCTGAGGAGCATCATAGTTCCTCCTATAGCGTCTTGTATTAA 729 0.4294 MYTNFNITFSTTPDLQQHNHLGEYESVPQLNSSGGGGGGGNYNSCSSGCASYLGSPDRLMQRSISSHSLQKNDVPHHHPFSTLFAELLDQENGPVRRVYSTGDLDQRVGGMQQYYHQSDSPLSTESNMIIEEMSRPASPYSPEEKKVRIERYRSKKNQRNYNKKIKYVCRKTLADSRPRIRGRFAKNDEIVRNPPNQWSHISNGEELEDEEEENWDSLFDSLVPTSNLAPEEHHSSSYSVLY* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1805 242 PANTHER CCT MOTIF PROTEIN 3 242 - -
Mtr4g1805 242 MobiDBLite consensus disorder prediction 195 216 - -
Mtr4g1805 242 ProSiteProfiles CCT domain profile. 145 187 IPR010402 GO:0005515
Mtr4g1805 242 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 3 242 IPR045281 GO:0009909
Mtr4g1805 242 Pfam CCT motif 147 187 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1805 Mtr-Chr4 31098188 31101822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1805 136 190 C2C2-CO-like Transcription Factor Family AT5G15850 47.273 9.31e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr4g1805 CCT 4.9e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1805 - - gmx:102667610 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1805 4 31098188 31101822 Mtr4g1805 4 31098188 31101822 ECH
Mtr2g3304 2 47116750 47119032 Mtr4g1805 4 31098188 31101822 PCT