Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1798 ATGAGTTGCTTTTGTATCCGTCCCAACAAAAGTAACACACAAAATGTCACCACCACCATCGCTTCCACTGCAAGTAACCCTGAGAATACAATCACCACTGTCGCCACCGCTTCCACTCTCCCACATAGCTTTCTTTCAAAGATTTTGGGAAAGGGAAAACTTGAATCCAAAGTGAATAAGAAAAAAGAGGATTCTGCATCTACGTATACTGAACCTGTGAAGTTAAATATAAGAAATGAGGCGATACAGAAATTCTGTTTTGATGAACTTAGTGCAGCAACAGACAATTTCAAGAACATTGTGGGTCAAGGAGGTTTTGGCGGAGTTTACCTAGGGATGCTTCAAACAAAACAGGTCGTAGCTATAAAGCGACGTGACTCAAACGGTGTACAAGGAACCCAGCAATTTATTGCTGAAGTGGAGACATTGAGTAATGTAAGCCACAAAAATATTGTCCAACTGATTGGATATTGTTATGAGAAGGAGCACAAGCTATTAGTTTACGAGTACATGGGTTTGGGATCTTTGGAAGATAATTTGTCAGATCATCATCGGCGAGGTATTCTTCATTGGGATACAAGAATGAGAATAGCAACTGAAATAGCAAAGGGTGTGGAGTATCTACATGTTAAAATGGATCCTCCTATGATATACCGTGACCTTAAAAGCTAA 672 0.3988 MSCFCIRPNKSNTQNVTTTIASTASNPENTITTVATASTLPHSFLSKILGKGKLESKVNKKKEDSASTYTEPVKLNIRNEAIQKFCFDELSAATDNFKNIVGQGGFGGVYLGMLQTKQVVAIKRRDSNGVQGTQQFIAEVETLSNVSHKNIVQLIGYCYEKEHKLLVYEYMGLGSLEDNLSDHHRRGILHWDTRMRIATEIAKGVEYLHVKMDPPMIYRDLKS* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1798 223 PANTHER OS07G0668900 PROTEIN 10 223 - -
Mtr4g1798 223 Gene3D Phosphorylase Kinase; domain 1 68 170 - -
Mtr4g1798 223 Pfam Protein kinase domain 98 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1798 223 ProSitePatterns Protein kinases ATP-binding region signature. 101 123 IPR017441 GO:0005524
Mtr4g1798 223 PANTHER SERINE/THREONINE-PROTEIN KINASE CDG1 10 223 - -
Mtr4g1798 223 ProSiteProfiles Protein kinase domain profile. 95 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1798 223 Gene3D Transferase(Phosphotransferase) domain 1 171 223 - -
Mtr4g1798 223 SUPERFAMILY Protein kinase-like (PK-like) 73 223 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1798 Mtr-Chr4 30978915 30981478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1798 79 223 Glycoside Hydrolase AT3G07070 54.362 2.50e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mtr4g1798 Pkinase 5.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1798 - - mtr:MTR_4g061570 441.425