Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1797 ATGAGTTGCTTTTGTATCTGTCCCAACAAAAGTAACACACAAAATGTCACCACCACCATCGCTTCCACTGCAAGTAACCCTGAGAATACCATCACCACTGTCGCCCCCGCTTCCACTCTCCCACATAGCTTTCTTTCAAAGATTTTGGGAAAAGGAAAGGGGAAGGGAAAGGAAAAAGTTGAATCCAAAGTGAATAAGAAAAAAGAGGATTCTGCATCTACTTCTAGAATTGTGACTTTAAATTTAGGAAATGAGGCGATACGGAAATTCTGTTTTGATGAACTTAGTGTAGCAACAGACAATTTCAGTAACATTGTGGGTCAAGGAGGTTTTGGCAAGGTTTACGGAGGGTACTTGCTTCAAACAAAACAGGCCGTAGCTATAAAGCGACATGGCTCAAACAGTCAACAAGGACCTGAGGCGTTTACTACTGAAGTGGAGACATTGAGTAATGCAAGCCACAAAAATATTGTCCAATTGATTGGATATTGTTGGGAGAATGAGCACAAGCTATTAGTTTACGAGTACATGAATTTGGGATCTTTGGAAGCTCATTTGTTAGATGATCATCTGCGAGGTTTTCTTGATTGGGGTACAAGAATGAAAATAGCTACTGAAACAGCAAAGGGTGTGGAGTATCTGCATGATAAAATGAATCCTCGTATGATATACTGTGACCTAAAAAGCTCAAACATTTTATTAGGCGATGGATATGATGTAAAGTTATCTGATTTTGGGTGTGCTAAAATAGGCCCAAAATATGCTTCAACAAAGATGTTTGGTACAATTGGATATTTTGATCCAGATTATATAAAAACAGGTACTTTGTCATTCAAATCAGATATTTACAGCTTTGGAGTTGTTCTTTTGGAGCTCATCAGTGGTAGAAGAGCTTTTGATGAAACAAGACGCGACGATGAACCAAATGTTGTTTTTTGGGCAAGTCCTTTATTTGAAGATAGATTCACAGAGATTGTTGACCCATTGCTAAAAGAGAAATTTCCTGAGAGAGATTTACAGAAAGTTATTGCCATTGTTGCATCATGTGTTCAAGAGAAAGCTGATAAGAGGCCTGATATAAGTCAAATTGTCGTAGAACTCGAAGCTCTAAATAAAATGAAGTCCCAAGTTGATGAAGCAGAAAGTTCTGGAGCAGCAGAGAGAAGGGTTGGACAAAGTTCTACATGA 1188 0.3855 MSCFCICPNKSNTQNVTTTIASTASNPENTITTVAPASTLPHSFLSKILGKGKGKGKEKVESKVNKKKEDSASTSRIVTLNLGNEAIRKFCFDELSVATDNFSNIVGQGGFGKVYGGYLLQTKQAVAIKRHGSNSQQGPEAFTTEVETLSNASHKNIVQLIGYCWENEHKLLVYEYMNLGSLEAHLLDDHLRGFLDWGTRMKIATETAKGVEYLHDKMNPRMIYCDLKSSNILLGDGYDVKLSDFGCAKIGPKYASTKMFGTIGYFDPDYIKTGTLSFKSDIYSFGVVLLELISGRRAFDETRRDDEPNVVFWASPLFEDRFTEIVDPLLKEKFPERDLQKVIAIVASCVQEKADKRPDISQIVVELEALNKMKSQVDEAESSGAAERRVGQSST* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1797 395 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Mtr4g1797 395 Gene3D Transferase(Phosphotransferase) domain 1 177 391 - -
Mtr4g1797 395 Pfam Protein kinase domain 104 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1797 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Mtr4g1797 395 Gene3D Phosphorylase Kinase; domain 1 72 176 - -
Mtr4g1797 395 SUPERFAMILY Protein kinase-like (PK-like) 87 365 IPR011009 -
Mtr4g1797 395 ProSiteProfiles Protein kinase domain profile. 100 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1797 395 SMART serkin_6 100 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1797 395 MobiDBLite consensus disorder prediction 376 395 - -
Mtr4g1797 395 PANTHER OS07G0668900 PROTEIN 57 378 - -
Mtr4g1797 395 PANTHER SERINE/THREONINE-PROTEIN KINASE CDG1 57 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1797 Mtr-Chr4 30974188 30976502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1797 47 367 Glycoside Hydrolase AT3G07070 46.386 1.45e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mtr4g1797 Pkinase 6.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1797 - - mtr:MTR_4g061570 519.62