Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1793 ATGAACAATAATGTTGGGAAAAAAAGTTTGGCAGAACAAAATCACGCGCTTAATGACAGAAAGAGTCTCAATAATAGAGTAGTTAATGAAGGGCCAGGGTCTGAATCATCAACTGGAAATGACACTAGATTTAGTAAGGTAACCAAAGATGGAAACAGTGGGTTGAAGGGATCGATTCGAATCAATGAGAGGTTGCAGATTTCACAACAACCACCACCTCGTAATCCAGTTACATACTGGGAAAAATTTCTCCCTGTTACATCAATAAAAGTTCTGCTGGTGGACGATGATGATTCAACACGCAACGTTGTGTGTGCTTTGTTAAGGAATTGTGGCTATGAAGTCAATGCTGTTTCCAATGGTCTTCAAGCGTGGAAAGTCCTAGAAGATCCAGGAAATCACATTGATCTTGTTCTAACAGAGATAGCTATGCCTTTTGTAACGGGAATAGGTCTTTTGTGCAAGATAATGAGTCACAAAACTCTAAAGAATATTCCTGTGATTATGATGTCATGTCATGATTCTATGGGTATAGTGTTTAAGTGTTTGTCAAAAGGCGCAGCTGATTTTTTAGTCAAACCTATTCGGAGGAACGAACTTAAAAACCTCTGGCAACATGTTTGGAGAAGATGCCATAGTTCTAGTGATAGTGGGAGTGAAAGTGGAACAAACACCCGGAAATTTGCAAAGTCAAGAAGCATTTGTGCATTTGACAACAATACTGGTAGCAGTGATGAGAATGATTATGGAAGCAGAGGCTTGAGTGTTCAAGATGGAAGTGACAAAGGAAGTGGAACTCAGAGTTCATGGACTACAAATCTAGCTCAAGTTAGCAGCAGCTCTCGTCCAGTTTCAACTCATAATCAATCTCATGATGCTCCTGATAGCACGTGTGCCCAAGTGGTGCATACAAAGCCTGAAAACATTCGTAGTATGTGTGTACATGCCACAGAAAAAGAGTTCCATGAACCAATTGATCATCCTGATGATATTGCAATGGGTAAAGATTTGGCTATGGGAATATCTTTGAACACACAACAAAAACATGCACTTCAGGAATTATCTAACAATCCAATGCGTAAAGGGGTTAATAAGATGTCTGATATAGATGGTATGCAGCTCAATAAAGGACAGAGTAATGTCTGTGAAAAAGTACAACTGGAAGAGGACAGTGATAAAAATAGGATGCAGGAAAATCAGGGTACAAATTTTGGTGTTGCTGATAGCAGCAGTCCACATGCTGAAAGCAGAGATTTGAACACTTCAAATGGTTTTTCTGGTTTTGCAAAAACAAAAGCAAGTTGTTGCTTCAAACAGCATCCATCACTTGAACTAACATTGGAAAGGATGGGAGAAGTAAAAGATGATGAACATGTCACAGGTGATGAATGTAATGTTTTGAGACATTCAAATCTATCAGCATTCTCCAAATATAATACAGCTTCTGCTTACCAGGCTCAAACTGGAAATGTAGGAAGCTGTTCCCCACTAGACAATAGCTCAGTTGCTCCAATTACAGACACAATACACAACTTCACATCTCATTCAAATGCCACTCCTCCAAATCAGCAGTCTAATGGAAGCAACAACATTAATGACCTGAATTCCACTAATACATATCTTAGCACGAAACCTGAAAATTTTGACAAGAAACCCAAGTCTGCTGGAGGGATTGACTCTTTTATTTCTTCTGAATTCCAAACTGTGCAAAATAATAGTATTTCTGCACCTCAGAAGAAGACTTCTTCCCAGGATGAATATGCCGGAATTGTTAAAGAACAGGTGCGAGGTTCTGAACAAGGGTTCCAAGTTGAGCACACTCACCATCAACTTCAACATTGTAATCGCATCGCCGATAAGGCTGCAGTAGATCTCCAATCAGTTCATGATCTCTTGCTGAAAAGCACGACCAAAGATGCTCAACAATGTACGTTATCAAATGCGCTTGGAGGGCCAGCAGAAAGTAATGGTACCAACTATGGTTTGGATGGAAGTGCAGTTGAGAGTGATCATGGGAGTAATGGAAAGGGTGGAAGCAACACTTTGACAATTAGAATGATAAATGTGGAAAATCATGATGTGGCAGCTGGGAGCATTGGAGTTGGTGCAATTGATAGAATAAACATTGGAATTGTGTCATATGCAGAACGAATTGCATTGAGGGAGGCTGCCTTGACAAAATTTCGTCAAAAGAGAAAAGAAAGATGCTTTGACAAAAAGGTTAGATATCACAGCAGGAAAAAATTGGCAGATCAGCGGCCACGTGTTAGGGGACAATTTGTTAAACAAATAGTGTCTGATACCAAAGAAGAAGAAATCAAAGAAAGCGAGGAACTTGTATCTATGGATAATTCTAGCGATGTTCCACAACAATACCAATCAAAATGTTGA 2391 0.3957 MNNNVGKKSLAEQNHALNDRKSLNNRVVNEGPGSESSTGNDTRFSKVTKDGNSGLKGSIRINERLQISQQPPPRNPVTYWEKFLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVNAVSNGLQAWKVLEDPGNHIDLVLTEIAMPFVTGIGLLCKIMSHKTLKNIPVIMMSCHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHVWRRCHSSSDSGSESGTNTRKFAKSRSICAFDNNTGSSDENDYGSRGLSVQDGSDKGSGTQSSWTTNLAQVSSSSRPVSTHNQSHDAPDSTCAQVVHTKPENIRSMCVHATEKEFHEPIDHPDDIAMGKDLAMGISLNTQQKHALQELSNNPMRKGVNKMSDIDGMQLNKGQSNVCEKVQLEEDSDKNRMQENQGTNFGVADSSSPHAESRDLNTSNGFSGFAKTKASCCFKQHPSLELTLERMGEVKDDEHVTGDECNVLRHSNLSAFSKYNTASAYQAQTGNVGSCSPLDNSSVAPITDTIHNFTSHSNATPPNQQSNGSNNINDLNSTNTYLSTKPENFDKKPKSAGGIDSFISSEFQTVQNNSISAPQKKTSSQDEYAGIVKEQVRGSEQGFQVEHTHHQLQHCNRIADKAAVDLQSVHDLLLKSTTKDAQQCTLSNALGGPAESNGTNYGLDGSAVESDHGSNGKGGSNTLTIRMINVENHDVAAGSIGVGAIDRINIGIVSYAERIALREAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQIVSDTKEEEIKESEELVSMDNSSDVPQQYQSKC* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1793 796 Pfam CCT motif 721 763 IPR010402 GO:0005515
Mtr4g1793 796 MobiDBLite consensus disorder prediction 397 420 - -
Mtr4g1793 796 MobiDBLite consensus disorder prediction 1 52 - -
Mtr4g1793 796 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 30 756 - -
Mtr4g1793 796 SUPERFAMILY CheY-like 88 215 IPR011006 -
Mtr4g1793 796 MobiDBLite consensus disorder prediction 648 677 - -
Mtr4g1793 796 ProSiteProfiles Response regulatory domain profile. 90 208 IPR001789 GO:0000160
Mtr4g1793 796 SMART REC_2 89 204 IPR001789 GO:0000160
Mtr4g1793 796 MobiDBLite consensus disorder prediction 511 545 - -
Mtr4g1793 796 MobiDBLite consensus disorder prediction 389 420 - -
Mtr4g1793 796 ProSiteProfiles CCT domain profile. 721 763 IPR010402 GO:0005515
Mtr4g1793 796 Gene3D - 88 246 - -
Mtr4g1793 796 PANTHER TWO-COMPONENT RESPONSE REGULATOR 30 756 IPR045279 GO:0009736
Mtr4g1793 796 MobiDBLite consensus disorder prediction 773 796 - -
Mtr4g1793 796 MobiDBLite consensus disorder prediction 1 73 - -
Mtr4g1793 796 MobiDBLite consensus disorder prediction 511 556 - -
Mtr4g1793 796 Pfam Response regulator receiver domain 91 202 IPR001789 GO:0000160
Mtr4g1793 796 MobiDBLite consensus disorder prediction 243 298 - -
Mtr4g1793 796 MobiDBLite consensus disorder prediction 648 663 - -
Mtr4g1793 796 CDD psREC_PRR 91 194 - -
Mtr4g1793 796 MobiDBLite consensus disorder prediction 782 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1793 Mtr-Chr4 30892779 30900259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1793 73 482 Response Regulator Gene Family AT5G60100 44.686 1.11e-85 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mtr4g1793 Response_reg 4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1793 K12129 - gmx:100785796 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1793 4 30892779 30900259 Mtr4g1793 4 30892779 30900259 ECH