Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1791 ATATCATTGCAGTATTTTCTATATCAACTCTTGCGAGGATTGAAGTACATACACTCTGCAAATGTTTTGCACCGTGATCTAAAACCAAGCAATTTACTTCTCAATGCAAACTGTGATCTCAAAATATGCGACTTTGGGCTTGCCAGAACAACCTCTGAGACAGACTTCATGACAGAGTATGTTGTGACTCGTTGGTATAGAGCCCCTGAATTGCTACTGAACTGTTCAGAATATACTGCTGCTATTGATGTATGGTCGGTTGGTTGCATTTTGATGGAGATAATTAGAAGGGAGCCTCTGTTTCCTGGTAAAGATTATGTTCAGCAATTGGCGCTCATAACTGAGTTGTTAGGTTCACCAAATGAAGAAGATCTCGGATTCCTCAGAAGTGATAATGCAAAGAAATTTACATACTTATTTTTTTTTGAGGAAGCACTGAATCAACCATATATGTCAAGTCTTCATGAGATCAACGAGGAGCCTGTTTGTCCATCCCCTTTCGTCTTTGATTTTGAACAGGCAACTCTGAATGAAGATGATATAAAGGAGCTCATATGGAGGGAGTCTCTGAACTTTTGCAAGGAGCAGATTCTTGAATAG 600 0.3933 ISLQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILMEIIRREPLFPGKDYVQQLALITELLGSPNEEDLGFLRSDNAKKFTYLFFFEEALNQPYMSSLHEINEEPVCPSPFVFDFEQATLNEDDIKELIWRESLNFCKEQILE* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1791 199 Gene3D Transferase(Phosphotransferase) domain 1 3 136 - -
Mtr4g1791 199 Gene3D Transferase(Phosphotransferase) domain 1 143 172 - -
Mtr4g1791 199 Pfam Protein kinase domain 4 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1791 199 SUPERFAMILY Protein kinase-like (PK-like) 4 155 IPR011009 -
Mtr4g1791 199 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 142 196 - -
Mtr4g1791 199 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 3 137 - -
Mtr4g1791 199 SMART serkin_6 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1791 199 Gene3D Phosphorylase Kinase; domain 1 173 193 - -
Mtr4g1791 199 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
Mtr4g1791 199 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 137 - -
Mtr4g1791 199 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 142 196 - -
Mtr4g1791 199 ProSiteProfiles Protein kinase domain profile. 1 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1791 Mtr-Chr4 30878209 30879804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1791 4 192 MAP Kinase Gene Family AT1G07880 67.411 8.56e-107 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Mtr4g1791 Pkinase 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1791 K04371 - gmx:100802929 340.887