Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1790 ATGGAAAACAAAAACCCTGAATCTGAGAAAGCAAACTCCAAAGGAACTCTGATTCACGATGGAAAATACATTCAATACAACGTCTTAGGCAACCTTTTCGAAGTCTACTCCAACTACATTCCTCCTCTTCAACCCGTCGGCCGCGGCGCATACGGCATCGTTTGCTGTGCAACTAACTCAGATACGAATGAAGGTGTTGCGATAAAGAAGATTGGGGATGCGTTTGATAATAGGATTGATGCTAAGAGAACACTGAGGGAAATTAAACTTCTCTGTCACATGGATCATGATAATGTGATTAAGATTAAGGATATAATTAAACCCGCCGATAAGGAAAAGTTTAATGATGTGTATATTGTGTATGAGTTGATGGATACTGATCTGCATCAGATTATTCAATCAAATCAGGCTCTCACTGATGAGCACTGCCAGTATTTTCTATATCAACTCTTGCGAGGATTGAAGTACATACACTCTGCAAATGTTTTGCACCGAGATCTAAAACCAAGCAATTTACTTCTCAATGCAAACTGTGATCTGAAAATATGCGACTTTGGGCTTGCCAGAACAACCTCTGAGACAGACTTCATGACAGAGTATGTTGTGACTCGTTGGTATAGAGCCCCTGAATTGCTACTGAACTGTTCAGAATATACTGCTGCTATTGATGTATGGTCGGTTGGTTGCATTTTGATGGAGATAATTAGAAGGGAGCCTCTGTTTCCTGGTAAAGATTATGTTCAGCAATTGGCGCTCATAACTGAGTTGTTAGGTTCACCAAATGAAGAAGATCTCGGATTCCTCAGAAGTGATAATGCAAAGAAATATGTTAAGCAGCTCCCGCACGTAGACAAGCAGCCCTTTGCAGAGAGGTTTCCTGATATGTCTCCACTGGCACTTGATCTTGCTGAGAAAATGCTGGTTTTTGATCCCTCCAAACGCATAACTGTTGAGGAAGCACTGAATCACCCATATATGTCAAGTCTTCATGAGATCAACGAGGAGCCCGTTTGTCCATCCCCGTTTGTCTTTGATTTTGAACAGGCAACTCTGAATGAAGATGATATAAAGGAGCTCATATGGAGGGAGTCTCTGAACTTCTGCAAGGAGCAGATTCTTGAATAG 1125 0.4142 MENKNPESEKANSKGTLIHDGKYIQYNVLGNLFEVYSNYIPPLQPVGRGAYGIVCCATNSDTNEGVAIKKIGDAFDNRIDAKRTLREIKLLCHMDHDNVIKIKDIIKPADKEKFNDVYIVYELMDTDLHQIIQSNQALTDEHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILMEIIRREPLFPGKDYVQQLALITELLGSPNEEDLGFLRSDNAKKYVKQLPHVDKQPFAERFPDMSPLALDLAEKMLVFDPSKRITVEEALNHPYMSSLHEINEEPVCPSPFVFDFEQATLNEDDIKELIWRESLNFCKEQILE* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1790 374 SMART serkin_6 40 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1790 374 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Mtr4g1790 374 Pfam Protein kinase domain 44 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1790 374 ProSitePatterns MAP kinase signature. 75 178 IPR003527 GO:0004707|GO:0005524|GO:0006468
Mtr4g1790 374 CDD STKc_TEY_MAPK 33 367 - -
Mtr4g1790 374 ProSiteProfiles Protein kinase domain profile. 40 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1790 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Mtr4g1790 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 17 371 - -
Mtr4g1790 374 SUPERFAMILY Protein kinase-like (PK-like) 43 332 IPR011009 -
Mtr4g1790 374 Gene3D Transferase(Phosphotransferase) domain 1 124 353 - -
Mtr4g1790 374 Gene3D Phosphorylase Kinase; domain 1 23 363 - -
Mtr4g1790 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 17 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1790 Mtr-Chr4 30870549 30875025 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1790 9 367 MAP Kinase Gene Family AT1G07880 79.387 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Mtr4g1790 Pkinase 1.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1790 K04371 - gmx:100802929 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1790 4 30870549 30875025 Mtr4g1790 4 30870549 30875025 ECH