Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1784 ATGGATCATTTCACAGAAAAACTACCTTCAATGGATCTCATGCGTTCCGAGAAGATGACATTTGTTCAAATCATCATTCCCGCTGAGTCCGCTCACCGAATCATCACCTATTTAGGCCAACTCGGTCTTCTTCAATTTCGCGACTTAAATGCTGAAAAAAGCCCCTTCCAGAGAACATTTGTTAACCAGGTAAAGCGATGCGCAGAAATGTCAAGAAAGCTACGGTTCCTCATGGATCAGGTCAATAAAGCTGGGATAATGTCATCCCATTCTGTCTTGCAATCAGATACAAACTTGGAGGATATAGAGACGCAACTTGCTGAGCATGAACATGAGATAATTGAAATGAACTCTAACAGTGAGAAACTTCAGCAATCATATAACGAACTTCTTGAGTTCAAAATTGTTCTGCAAAAGGCATGTAATTTTCTTGTTTCAAGTCACGGACATGCCCTTTCAGAAGAGAGAGAACTGGTGGAAAATGTTTACTCAAATGAGGACTTCGTTGAGACGCCATTTTTGTTTGAACAGGAAACGATGCCTGGACCATCAAAATCTAACCAATCTGGTTTAAGATTTATCAGCGGGATAATTTGTAAATCCAAAGTTCTCAGGTTTGAAAGGATGTTGTTTCGTGCCACAAGAGGCAATATGCTTTTCAATCAGGCACCGGCTGATGAGCAAATTATGGATCCTATTTCAACTGAGATGGTTGAGAAAACTGTGTTTGTTGTGTTTTTCTCTGGGGAGCAAGCTAGAACGAAGATTCTGAAAATTTGTGAAGCTTTTGGTGCAAATTGTTACCCTGTTCCTGAAGATATAAGTAAACAAAGGCAAATAACCCGGGAGGTTTCATCGCGCCTTGCTGACTTAGAGGCAACTTTGGATGCTGGGATTAGGCATCGGAATAAGGCTCTATCTTCTGTAGGAGGTCATTTAGCAAAATGGATGGACATGGTAAGAAGAGAGAAGGCTGTGTATGACACGCTGAACATGTTAAATTTTGATGTCACCAAAAAATGTCTTGTTGGAGAGGGATGGTGTCCAATATTTGCAAAAGCACAGATTCAGGATGCACTGCAACGTGCAACTTTTGACAGCAATTCTCAAGTGGGGGCAATCCTTCATTCAATGGATGCACTAGAATCGCCACCTACATATTTTAGAACCAACAGTTTCACAAATCCATATCAAGAAATTGTAGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCAGCAGTTTACACAACTATTATATTCCCATTTCTTTTTGCGGTGATGTTTGGCGACTGGGGTCATGGAATTTGCCTGCTGCTTGGAGCATTGGTTCTTATAGCACATGAAAGGAAGCTCAGCAATCAGCGACTAGGAAGCTTTATGGAGATGTTATTTGGTGGGCGCTATGTGCTTCTTTTGATGTCACTATTTTCAATGTATTGTGGGTTAATCTACAATGAATTCTTCTCGGTTCCTTTTCACATATTTGGTGCGTCTGCTTACAAATGCCGAGATAGTTCATGCAGGGATGCACACACTACTGGCTTAGTAAAATACAGAGAACCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCCTTTCTAAACTCTCTCAAGATGAAGATGTCCATTCTATTTGGTGTGGTACATATGAACTTGGGAATTTTATTAAGTTATTTCAATGCTCATTTCTTTGGCAGCTCACTGGATATAAGGTATCAGTTTGTGCCGCAGATGATTTTCCTTAACAGTCTATTTGGGTATCTTTCCCTTCTCATTGTTGTCAAGTGGTGTACTGGCTCTCAGGCAGACCTTTATCATATAATGATTTACATGTTTTTAAGCCCCTTTGACAATCTTGGTGAGAATGAGTTGTTCTGGGGCCAAAGGCCACTTCAGATTTTGTTATTGCTTCTGGCTCTAATTGCAGTTCCATGGATGCTCTTTCCAAAGCCTTTTATATTAAAGAAACTTCATAATGAGAGATTTCAAGGACGCAATTATGGTGTGCTTAATACCTTTGAAGCGGATCTTGAGGTTGAACCGGATTCTGCCAGGCAACATCATGAGGAATTTAATTTCAATGAGGTCTTTGTTCACCAAATGATTCACTCCATTGAGTTTGTTCTTGGTTCTGTTTCAAATACAGCATCATATCTTCGACTTTGGGCATTAAGCTTGGCTCATTCAGAACTTTCAACTGTTTTTTATGAGAAAGTCCTGCTACTAGCTTGGGGGTATGACAATCTTATCATTCGGTTAGTGGGGCTAGTTGTTTTTGCATTTGCAACTGCTTTTATACTACTTATGATGGAGACTCTGAGCGCTTTTCTTCATGCCCTGCGTCTTCATTGGGTTGAATTTCAAAATAAATTCTACCACGGTGATGGATACAAGTTCAGACCTTTTTCCTTTGCCACCTTAACAGAGGATGAAAATTGA 2463 0.4032 MDHFTEKLPSMDLMRSEKMTFVQIIIPAESAHRIITYLGQLGLLQFRDLNAEKSPFQRTFVNQVKRCAEMSRKLRFLMDQVNKAGIMSSHSVLQSDTNLEDIETQLAEHEHEIIEMNSNSEKLQQSYNELLEFKIVLQKACNFLVSSHGHALSEERELVENVYSNEDFVETPFLFEQETMPGPSKSNQSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADEQIMDPISTEMVEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLADLEATLDAGIRHRNKALSSVGGHLAKWMDMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKAQIQDALQRATFDSNSQVGAILHSMDALESPPTYFRTNSFTNPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIAHERKLSNQRLGSFMEMLFGGRYVLLLMSLFSMYCGLIYNEFFSVPFHIFGASAYKCRDSSCRDAHTTGLVKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVVHMNLGILLSYFNAHFFGSSLDIRYQFVPQMIFLNSLFGYLSLLIVVKWCTGSQADLYHIMIYMFLSPFDNLGENELFWGQRPLQILLLLLALIAVPWMLFPKPFILKKLHNERFQGRNYGVLNTFEADLEVEPDSARQHHEEFNFNEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLIIRLVGLVVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFATLTEDEN* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1784 820 PIRSF ATP6V0A1 9 820 IPR026028 GO:0000220|GO:0046961
Mtr4g1784 820 PANTHER VACUOLAR PROTON ATPASES 6 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
Mtr4g1784 820 Pfam V-type ATPase 116kDa subunit family 37 812 IPR002490 GO:0033179|GO:0046961|GO:1902600
Mtr4g1784 820 Coils Coil 92 126 - -
Mtr4g1784 820 PANTHER VACUOLAR PROTON ATPASE A1 6 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1784 Mtr-Chr4 30752293 30764185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1784 1 815 Primary Pumps ATPases(2) AT2G28520 78.755 0.0 1330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1784 K02154 - gmx:100800799 1483.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1784 4 30752293 30764185 Mtr4g1784 4 30752293 30764185 ECH
Mtr2g3200 2 45819831 45832665 Mtr4g1784 4 30752293 30764185 PCT