Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1775 ATGGAGAGTGCTACTAGTGACACTTTCACTGCTCCTACTTCTTCATCTACTCAAGCTGTTGTTATGAGTCCTTGTGCTGCTTGCAAGATTTTGAGGAGAAGATGTGCTGCTGATAAATGTGTTTTGGCACCTTATTTTCCTCCTACTGACCCTGCCAAGTTTACCATTGCTCATAGAGTTTTTGGTGCTAGCAACATCATCAAATTCTTACAGGAACTTCCAGAAGATCAAAGAGCTGATGCAGTGACAAGCATGGTTTATGAGGCTAGTGCAAGAGTTAGAGACCCAGTTTATGGTTGTGCAGGAGCAATTTGCCAACTCCAAAAGCAAGTCAATGAGCTTCAAGCACAACTAGCCAAATCACAAGCTGAGGTTGTAAACATGAAACTCCAACAAACCAATCTTGTTGCTCTATTTTTGGAAATTTCACAAAGTCCTCAAGAATCACCACAACAAATATCAGTTGATGATTTCATTCAAAGTCCTTCCCATAGCGACGGACATCATATTGGTTTGAACTTTCTTGATGACAACACTGGCCTATGCTCAGGGTGGGATACACTTTGGACATGA 573 0.4154 MESATSDTFTAPTSSSTQAVVMSPCAACKILRRRCAADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPEDQRADAVTSMVYEASARVRDPVYGCAGAICQLQKQVNELQAQLAKSQAEVVNMKLQQTNLVALFLEISQSPQESPQQISVDDFIQSPSHSDGHHIGLNFLDDNTGLCSGWDTLWT* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1775 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 14 187 - -
Mtr4g1775 190 Coils Coil 104 131 - -
Mtr4g1775 190 Pfam Lateral organ boundaries (LOB) domain 24 122 IPR004883 -
Mtr4g1775 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 14 187 - -
Mtr4g1775 190 ProSiteProfiles LOB domain profile. 23 125 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1775 Mtr-Chr4 30635679 30637996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1775 20 190 AS2 family AT2G28500 65.591 5.09e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr4g1775 LOB 1.1e-39 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1775 4 30635679 30637996 Mtr4g1775 4 30635679 30637996 ECH
Mtr2g3205 2 45897082 45900090 Mtr4g1775 4 30635679 30637996 PCT