Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1761 ATGGAAATTGATCTAAACAATGAAGTGATTGAGGTTGAGAAGAATGCATTGTGCCATAAGGAATGTGAAAAAGGTTTTTGTTTCTGTGTTTCTTGTTTGTCTCCTTCAACTTGTTCATCTTCAAGTTCAACTTCACCACTTGTTTCTTCTTCTTATCTTGAATTATGGCATGCTTGTGCTGGTCCTCTTACCTCACTTCCTAAGAAAGGAAATGTTGTGGTGTATTTTCCACAAGGTCACTTGGAACAATTTGCTTCTTTTTCTCCTTTTAAGCAATTGGAGATACCAAACTATGATCTTCAGCCTCAGATCTTTTGCAGGGTTGTCAATGTCCAACTACTTGCCAACAAGGAGAATGATGAGGTTTATACGCAAGTTACTCTGCTACCTCAGGCTGAGTTGGCAGGGATGCATATGGAAGGAAAAGAAGTTGAGGAATTAGAAGGAGATGAAGAGGGAGATGGAGGGTCGCCTACAAAATCAACCCCTCACATGTTCTGCAAGACACTAACTGTCTCTGATACCAGCACTCATGGTGGATTCTCTGTGCCTCGTAGAGCTGCTGAAGATTGTTTTCCTCCTTTGGACTATAAGCTGCAGAGACCCTCTCAAGAGCTTGTTGCCAAAGACCTGCATGGTGTGGAGTGGAAATTTCGCCATATTTATAGAGGTCAGCCAAGGCGGCATCTACTCACTACTGGCTGGAGCATTTTTGTGAACCAAAAGAATCTTGTTTCTGGTGATGCTGTGCTCTTTCTAAGGGGTCAAAATGGAGAGCTGAGATTGGGAATCAGAAGAGCTGTTAGACCTAGAAACGGTCTTCCTGAATCAATCGTTGGTAATCAGAATTGTTATCCCAATTTCCTTTCATCTGTTGCAAATGCTATATCCACCAAAAGCATGTTTCATGTTTTCTATAGTCCAAGAGCAAGCCATGCCGAATTTGTTGTTCCCTACCAAAAATATGTTAAAAGCATCAAGAATCCAATGACCATAGGGACAAGATTCAAAATGAGAATTGAAATGGACGAATCGCCTGAAAGAAGGTGTAGTAGTGGTATGTTGATTGGAATAAATGACTTGGATCCCTATAGATGGCCTAAATCAAAATGGAGGTGCTTGATGGTAAGATGGGATGATGATACTGAGACTAATCATCAAGACCGAGTATCTCCATGGGAGATCGATCCTTCTTCTCCTCAGCCTCCCCTAAGCATTCAGTCTTCCCCAAGACTGAAGAAACCGCGGACCGGTCTACTGGTTGCCTCACCCAATCACCTCATCACTGGTATGAATCCTAATGCAGGAATCAGTGGAATGATGGGTTTTGAGGAGTCAGTAAGATCACCAAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTATGTCACTATACTATGGATGTGACAAAGTAACCAACCAGCCAGGTTTTGAGTTGAGCACTTCAAGTCATCATCAAAACCTTGCATCAACTGGAATAGGAAAAGTAGTTACCTCTTCTGAGCTTATGAGTGTTCATCCTTTCAGTTATGCAGGCTTTATGGAAAGTAACAACTTTCCAAGGGTCTTGCAAGGTCAAGAAATATGTAAACTGAAATCCCTTTCAGGAAAAGTTGATTTCAACATTGGAGCTTGGGGAACCAAGCCCAGTTTTCAATCTGCATGTTTTCCTTATGGAGATATTGACAAATCCAATCAAGCTAGCATGTTTAGCTCAAAACACACCAGTTTCATGAGTGATAATGTCCCGTTTAACACGCCATCGATAGTGGCAGGGGACATTAGAAAAGAAGTTGGAAGATCTGGATCTAATCTCCTTCCAAATGAGCATAAGCTGCAGGACAATGTTTCTGCTTCTGCTTCATTAGTGGATACTAATAGAAATGCTCCAAATGATAACAATGTCAAGGGAAAGGCAAATTCCTGCAAACTATTCGGCTTTCCTTTGTCTGGCGAACCTAGTAGCCAAAATTTACAGAACACGGCAAAAAGGAGTTGCACAAAGGTTCACAAGCAAGGAAGCTTAGTTGGAAGAGCCATTGATCTCTCTAGGTTGAGCGGCTACAATGATCTTCTGAGTGAACTGGAGAAACTATTTGGCATGGAAGGACTTCTTAGAGATTCTGATAAGGGATGGAGGATCCTCTACACTGACAGTGAGAATGACATAATGGTTGTGGGGGATGATCCATGGCATGAGTTTTGTGATGTGGTGTCGAAGATCCATATATATACCAAAGAAGAAGTGGAGAAGATGACATTTGGGATGATGACCAATGATGATACTCATAGCTGTTTGGATCAGGCACCAGTTATTATTGAACCTTCAAAGTCTTCCTCAGTTGGTCAGCCAGATTATTCTCCAACAGTAGTAAGAGTCTAA 2382 0.4165 MEIDLNNEVIEVEKNALCHKECEKGFCFCVSCLSPSTCSSSSSTSPLVSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQFASFSPFKQLEIPNYDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDEEGDGGSPTKSTPHMFCKTLTVSDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVNQKNLVSGDAVLFLRGQNGELRLGIRRAVRPRNGLPESIVGNQNCYPNFLSSVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSIKNPMTIGTRFKMRIEMDESPERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDDDTETNHQDRVSPWEIDPSSPQPPLSIQSSPRLKKPRTGLLVASPNHLITGMNPNAGISGMMGFEESVRSPKVLQGQENTGFMSLYYGCDKVTNQPGFELSTSSHHQNLASTGIGKVVTSSELMSVHPFSYAGFMESNNFPRVLQGQEICKLKSLSGKVDFNIGAWGTKPSFQSACFPYGDIDKSNQASMFSSKHTSFMSDNVPFNTPSIVAGDIRKEVGRSGSNLLPNEHKLQDNVSASASLVDTNRNAPNDNNVKGKANSCKLFGFPLSGEPSSQNLQNTAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDKGWRILYTDSENDIMVVGDDPWHEFCDVVSKIHIYTKEEVEKMTFGMMTNDDTHSCLDQAPVIIEPSKSSSVGQPDYSPTVVRV* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1761 793 SUPERFAMILY CAD & PB1 domains 666 743 - -
Mtr4g1761 793 Gene3D - 660 753 - -
Mtr4g1761 793 ProSiteProfiles PB1 domain profile. 664 746 IPR000270 GO:0005515
Mtr4g1761 793 SUPERFAMILY DNA-binding pseudobarrel domain 158 277 IPR015300 -
Mtr4g1761 793 MobiDBLite consensus disorder prediction 144 163 - -
Mtr4g1761 793 Gene3D - 330 401 - -
Mtr4g1761 793 Pfam Auxin response factor 292 374 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mtr4g1761 793 PANTHER AUXIN RESPONSE FACTOR 9 781 - -
Mtr4g1761 793 Pfam B3 DNA binding domain 166 267 IPR003340 GO:0003677
Mtr4g1761 793 Gene3D - 164 268 IPR015300 -
Mtr4g1761 793 ProSiteProfiles B3 DNA-binding domain profile. 166 268 IPR003340 GO:0003677
Mtr4g1761 793 MobiDBLite consensus disorder prediction 384 413 - -
Mtr4g1761 793 CDD B3_DNA 164 266 IPR003340 GO:0003677
Mtr4g1761 793 SMART B3_2 166 268 IPR003340 GO:0003677
Mtr4g1761 793 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 9 781 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1761 Mtr-Chr4 30443530 30449590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1761 48 793 B3 DNA Binding Superfamily AT5G60450 59.868 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mtr4g1761 B3 9.5e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1761 - - gmx:100783513 1224.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1761 4 30443530 30449590 Mtr4g1761 4 30443530 30449590 ECH
Mtr2g3218 2 46086866 46091841 Mtr4g1761 4 30443530 30449590 PCT