Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1746 ATGTTTGATAAGGCTCTTTCTTATATAAAAGCTATTTTGTGCTGTAACTGCTTCGGGTTTATCAACAGACGGAACCCTCAAAGGGGTACGCCTGCCATCTACAATAGTACTCTCTCCCAGGGGCTGTTGTTGGATAGTGATTTCGATGATGAAGATTCCTTCTTTAATGATGAGATTACTAACTACTCTAGTGGAGAGGATAATGAGGAGCAAATTCGTCCCAAACGATCTGAGGATATTTTGGATTTTAGAGTAGAGAATGGTATGATTTGTAGACAGTTTCCTGTTAAAGAGACTCACAAAGTTGTTCGCACAGAGGATGAAGATGGAAACAAGATGATAAATGAGTATGTTCGTGAGTACAAGATTGGTTCTGGTAGCTATGGGAAAGTGGCTCTTTATCGAAGCTCTGTTGATGGAAAACATTATGCAATTAAGGCTTTTCATAAGTCTCATTTAATGAAGCTTCGAGTTGGACCTTCAGAAACAGCCATGACTGATGTTCTACGTGAGGTTTTCATTATGAAAATGCTGCAACATCCTAATATAGTCAACCTGATTGAGGTGATTGATGACCCAGAATCGGATAACTTCTACATGGTACTTGAATATGTGGAAGACAAATGGGTTTGTGAGGCTTCAGGTCGAGCTTGTGCCTTGCGTGAAGAGACTGCTAGGAGATACTTGCGGGATATAGTTTGTGGATTAATGTATCTCCATGCTCATAATATAGTACATGGAGATATCAAACCTGATAATCTGTTGATCACCCGTCATGGTACAGTGAAGATAGGGGATTTCAGTGTCAGCCAGGCTTGTGAGGATGATAATGATATGCTTCGACGATCACCTGGAACTCCTGTTTTCACTGCACCTGAATGTATTTTAGGTGTTACCTACAGTGGTAAAGCTGCTGACACATGGGCTGTAGGAGTTACTTTATACTGTATGATATTGGGTGAATACCCTTTTCTTGGTGACACACTTCAAGATACATATGATAGAATAGTCAATGATCCGATAGTACTCCCAAAGAATCTGAATCCGAGGTTGAAGAACTTAATTGAAGGACTACTTTCTAAAGACCCAAAACTAAGGATGACGTTGGCTGATGTTGCGGCGGATAGCTGGGTTATTGGAAATGATGGGCCAATTCCTCAGTACCTGTGTTGGTGTAAAAGGAAGAACTTGTTGAAGGAAGACAATGATGAGAGCAACCAACATGCTTCGTTGACCTATACTGACTGA 1248 0.4071 MFDKALSYIKAILCCNCFGFINRRNPQRGTPAIYNSTLSQGLLLDSDFDDEDSFFNDEITNYSSGEDNEEQIRPKRSEDILDFRVENGMICRQFPVKETHKVVRTEDEDGNKMINEYVREYKIGSGSYGKVALYRSSVDGKHYAIKAFHKSHLMKLRVGPSETAMTDVLREVFIMKMLQHPNIVNLIEVIDDPESDNFYMVLEYVEDKWVCEASGRACALREETARRYLRDIVCGLMYLHAHNIVHGDIKPDNLLITRHGTVKIGDFSVSQACEDDNDMLRRSPGTPVFTAPECILGVTYSGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDRIVNDPIVLPKNLNPRLKNLIEGLLSKDPKLRMTLADVAADSWVIGNDGPIPQYLCWCKRKNLLKEDNDESNQHASLTYTD* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1746 415 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Mtr4g1746 415 SMART serkin_6 117 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1746 415 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 407 - -
Mtr4g1746 415 Gene3D Transferase(Phosphotransferase) domain 1 215 385 - -
Mtr4g1746 415 CDD STKc_LKB1_CaMKK 123 378 - -
Mtr4g1746 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Mtr4g1746 415 Gene3D Phosphorylase Kinase; domain 1 111 214 - -
Mtr4g1746 415 Pfam Protein kinase domain 117 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1746 415 ProSiteProfiles Protein kinase domain profile. 117 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1746 415 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 407 - -
Mtr4g1746 415 SUPERFAMILY Protein kinase-like (PK-like) 111 390 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1746 Mtr-Chr4 30158535 30164005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1746 112 385 CBL-interacting serine-threonine protein kinases AT5G35410 32.482 2.88e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Mtr4g1746 Pkinase 6e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1746 K00908 - gmx:100789178 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1746 4 30158535 30164005 Mtr4g1746 4 30158535 30164005 ECH