Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1715 ATGAAGTCACAGATCAAAATTGCTCTTGCTATTGTTATTAGTTTGCTTTGGATTCAACACTCCATTTGTGATGAAGCATCTGATACATCTGTCCTAAACAAGTGGAAATGTAGATGTTCTTCTTTTGAAGGGAATCAAAGCAACTCTCTTGCTAATTGTTCAAAATCATGCGATTGCCACTCAGATCCCGAAGAGGGTGCATCTATATGGACATGTATTTGTGATCCCAATGGATTTCCCGAAGTGGCAGCAGATGGTAATAGCTCTAATTGCTTTCACGCCTGCAACTGCACCTGGGGAACTGTCAGCACGTCATTAGGTTCAAAGAAACACATTTCCAGCAAGGTTGTTGTAGTTATCCTAGTGATATGTGTTATATGCACAACTATTGCATTGCTTACCTCAGCTGTATGCTACGTCTACCGAAGGGACAGATGCTCTATTCAATCACCAATATTCTCGTCAGATAAGGAAACCAGTAGTGGTAGTACCGCCAACCTAATCAGCTATAGGACAGGAATTTCTTCAGTGACAGAAACAAAACTTTTTATAAGTTCTCCTATTTGTCACATCACAGGATGCTTTCAGAAACCTTCTTTTTTGTTTGGGAGCCAAAAAGAAACTTTCTATGGAAACATTATTCAATTTCCATTTACTGAACTGGAAAGTGCCACCGATAACTTTTCAGCTACCAACCTTATTGGAGTAGGCGGAAGTAGTTACGTATACCGTGGTCGGCTAAAAGATGGCAATATTGTGGCAGTTAAACGCCTAAAAGATCATGGAGGGCCAGAAGCAGACTCTGCATGTTTCAAGGAGATTGAACTATTAGCTAGACTTCATCATTGTCATTTGGTGCCGTTACTTGGATACTGCTTAGAATCAAAAGGAAAACATGTTCAAAGGTTATTAGTATTTGAGTACATGAATAATGGAAATTTGAGGGAGTGTTTAGATGGAGTTTCTGGAAAATATATGGATTGGACTACTCGTGTTATGATTGCAGTTGGAGCAGCAAGGGGCTTGGAATATCTCCATGAAGCAGCTGCTCCAAGAATTCTTCATAGAGATGTGAAATCAACCAACATTCTTCTAGATGAAAATTGGCAAGCAAAGATCACTGATCTTGGTATGGCTAAAAACTTGAGATCTGATGACCTACCAAGCGGTTCAGATTCTCCAGCAAGAATGCAAGGGACATTTGGCTATTTTGCACCTGAGTATGCGATTATTGGTAGAGCCTCTCTTGAATCAGACGTCTTTAGTTTTGGTGTGGTTCTTCTCGAGCTTATCACGGGTCGACATCCTATCCATAAAACTACCGGAAAAGAAGAAAGCCTCGTTATATGGGCTTCTCCTCGTTTGCTGGACAGTAGACGAATAATATCGGAGTTAGTTGATCCACAATTGGAAGGAAACTTCCTAGAAGAAGAGGTGCATATAATGGCATACCTAGCAAAGGAGTGCTTGCTTCTGGATCCAGACACTCGACCAACAATGAGCGAGGTTGTTCAAATTCTTTCAAGTATTTCTCCGGGAAAATCAAGGAGGAGAAGAAACATTCCCGCTAGCTTGTTTCAGGAAGCGGAGAATGCAGAAGAGCAAAGGCAAGTTCCATCCAATGAATTTGCAACTCATAATTTATCATCACTAGATATCGATCATAATCCGTGTGTTGGAAACAAAAATAAAGAAGCAGATGCAGTTTCAGCTGAGTATATGGAAAGTTTAATCTTGTTGTCATCAAAATCTAATAGCTCTCATGCATCAGAAGAGGAAATCGTAGACATAACCGAGCCTCGGTTCGAATCATTTTGCATGACAGATGGACTGTCCCTTGAAAATACTCTCCTTGAATAA 1860 0.4038 MKSQIKIALAIVISLLWIQHSICDEASDTSVLNKWKCRCSSFEGNQSNSLANCSKSCDCHSDPEEGASIWTCICDPNGFPEVAADGNSSNCFHACNCTWGTVSTSLGSKKHISSKVVVVILVICVICTTIALLTSAVCYVYRRDRCSIQSPIFSSDKETSSGSTANLISYRTGISSVTETKLFISSPICHITGCFQKPSFLFGSQKETFYGNIIQFPFTELESATDNFSATNLIGVGGSSYVYRGRLKDGNIVAVKRLKDHGGPEADSACFKEIELLARLHHCHLVPLLGYCLESKGKHVQRLLVFEYMNNGNLRECLDGVSGKYMDWTTRVMIAVGAARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGMAKNLRSDDLPSGSDSPARMQGTFGYFAPEYAIIGRASLESDVFSFGVVLLELITGRHPIHKTTGKEESLVIWASPRLLDSRRIISELVDPQLEGNFLEEEVHIMAYLAKECLLLDPDTRPTMSEVVQILSSISPGKSRRRRNIPASLFQEAENAEEQRQVPSNEFATHNLSSLDIDHNPCVGNKNKEADAVSAEYMESLILLSSKSNSSHASEEEIVDITEPRFESFCMTDGLSLENTLLE* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1715 619 Gene3D Transferase(Phosphotransferase) domain 1 309 530 - -
Mtr4g1715 619 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 607 - -
Mtr4g1715 619 Gene3D Phosphorylase Kinase; domain 1 202 308 - -
Mtr4g1715 619 Pfam Protein kinase domain 231 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1715 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Mtr4g1715 619 ProSiteProfiles Protein kinase domain profile. 228 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1715 619 SUPERFAMILY Protein kinase-like (PK-like) 208 507 IPR011009 -
Mtr4g1715 619 SMART serkin_6 228 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1715 619 PANTHER OS01G0253100 PROTEIN 2 607 IPR045271 GO:0004714|GO:0006468
Mtr4g1715 619 ProSitePatterns Protein kinases ATP-binding region signature. 234 256 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1715 Mtr-Chr4 29830845 29837508 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1715 1 609 Receptor kinase-like Gene Family AT2G28250 51.545 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Mtr4g1715 Pkinase 3.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1715 - - gmx:100817870 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1715 4 29830845 29837508 Mtr4g1715 4 29830845 29837508 ECH
Mtr2g3260 2 46627072 46632996 Mtr4g1715 4 29830845 29837508 PCT