Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1711 ATGGGAACTAATCTTGTACTTATGTATAACAACAAAGTCATGATTCATCTTTGGTTTATCATATGTATATGCATAAATTCATGCTATTCTCAACAACCTTACGACAGTTCTAATTGTTATTCAAATGAAACATCACCAGGTTCAAGGTACACTTGCAATTCAACACATGACACATGCAAAACATTCTTAGTATATAGAGCAAATCAAAATTTCCAAACCATTTCACAAATCTCAAACCTCTTCAACAAAAACACCAATGAGATTCTTCACATAAACAACCTCACATCTTCTTCACAAATACTCAAACAAGGTAAAGAAGTTCTTATTCCTATTGAATGTACATGTTCTAACCAATTTTACCAAGCCAAACTCAGCTACAAAAATCTTGAAAGCTCAACAACATTTTCCAATATTGCTTGTGAGGTTTTTGAAGGTCTATTGAAACATGTCACACTTTCCGATCAAAACGAAAATCAAGGTAATGAACCGAAATTCGGTGATGTTATTCATGTACCTCTTAGATGTTCATGTCCAAAAAATTACTCTAGTATTATGAAAGGTGTAATAAAGTACTTTGTTACATACCCTCTTATACAAGGAGATAATTTTGATAAATTGAGTAAAAAATTTGGTATCTCACTTGATGATTTCTTGGAAGCAAATCAATTGCAACCCTTGTCATCAGTTTTTCCTCAGACGGTTGTTTTGATTCCAATAAGAGATGCAAATGGTCCAATCAAAATATTCGACATTCCAGATTCTCCTTCGCCACCTCCTAATTTTCTTCCAACAAATCCGTTTACACAAGAATCAACACAACCATCAAATTTGTATATTGCAGGACCTATTATAGGTTTTGTATTGTTCATTACATTGGTTGCAAGTGGATTTTATATGAAGAAATTGAGAAAAACTGATGATGTTATTGATTCCTTTAATCCAACAAACTCAACCACTTTATGGTCACCAATAAGAACCTCTACAACTTCATGCTTATCTCCTGATTTTCTTGTTGGTATCAAGTATTGTTTGCTTAATTACCATATAGAAGAGATTGAAAAAGCTACAAATTTTTTTAGTGATGTGAACAAGATTGGTGATTTTGCTTATAAGGGGTTAATCAATGGTATTGAGGTTATGATAAAGAGGATGAGATTTGAAGACACTAGTGAGGTAATTGATTTACATTCAAGAATCAATCACATTAATATTGTGAATTTAATTGGTGTTTGTTATGGTGAGAGTGATTTAATTTCATGGTCTTATTTAGTTTTTGAGTTACCTAAAAATGGTTGCTTAAGGGATTGTTTAATGGATCCATGCAATACTTTAAATTGGCATAGAAGGACACAAATAGTATTTGACATAGCAACATGTCTTTACTATTTACATTATTGTTCTTTTCCTTCTTATGCTCACATGAATGTGAATAGTAGAAATATATTTGTAACTGAAAATTGGAGAGGAAAATTGGCAGATGTGGGGGGTGTATCTAACAATCTTTTGCATGGGACAGTTTCACAAAAGGTTGATATTTTTGCATTTGGTGTTGTGTTGCTTGAGTTGATATCAGGAAGAGAAAAGTTTGATGGAAAATTGGTTAAAGATTGTGTTGGATTTTTGTTTGGGGAAGGTAGTGAAGGTGGTGGTTGTTTTGAGGGGTTAAGGAATTTTGTGGATCCAAATTTGAAGGATTATTCACTTCCAGAGGCTCTTTGTTTGTGTTTTTTAGCTAAGGATTGTGTGAAAGATGATCCATTGCATAGGCCAACTGTGGATGATATCATGAAGGTTCTTGCAAAAATGGTTTAG 1812 0.3289 MGTNLVLMYNNKVMIHLWFIICICINSCYSQQPYDSSNCYSNETSPGSRYTCNSTHDTCKTFLVYRANQNFQTISQISNLFNKNTNEILHINNLTSSSQILKQGKEVLIPIECTCSNQFYQAKLSYKNLESSTTFSNIACEVFEGLLKHVTLSDQNENQGNEPKFGDVIHVPLRCSCPKNYSSIMKGVIKYFVTYPLIQGDNFDKLSKKFGISLDDFLEANQLQPLSSVFPQTVVLIPIRDANGPIKIFDIPDSPSPPPNFLPTNPFTQESTQPSNLYIAGPIIGFVLFITLVASGFYMKKLRKTDDVIDSFNPTNSTTLWSPIRTSTTSCLSPDFLVGIKYCLLNYHIEEIEKATNFFSDVNKIGDFAYKGLINGIEVMIKRMRFEDTSEVIDLHSRINHINIVNLIGVCYGESDLISWSYLVFELPKNGCLRDCLMDPCNTLNWHRRTQIVFDIATCLYYLHYCSFPSYAHMNVNSRNIFVTENWRGKLADVGGVSNNLLHGTVSQKVDIFAFGVVLLELISGREKFDGKLVKDCVGFLFGEGSEGGGCFEGLRNFVDPNLKDYSLPEALCLCFLAKDCVKDDPLHRPTVDDIMKVLAKMV* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1711 603 Pfam LysM domain 199 238 IPR018392 -
Mtr4g1711 603 ProSiteProfiles Protein kinase domain profile. 348 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1711 603 ProSiteProfiles LysM domain profile. 193 237 IPR018392 -
Mtr4g1711 603 SUPERFAMILY Protein kinase-like (PK-like) 342 599 IPR011009 -
Mtr4g1711 603 CDD LysM 199 237 IPR018392 -
Mtr4g1711 603 Gene3D Phosphorylase Kinase; domain 1 341 426 - -
Mtr4g1711 603 Gene3D LysM domain 186 244 IPR036779 -
Mtr4g1711 603 Gene3D Transferase(Phosphotransferase) domain 1 429 498 - -
Mtr4g1711 603 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 14 602 - -
Mtr4g1711 603 Gene3D Transferase(Phosphotransferase) domain 1 499 603 - -
Mtr4g1711 603 Pfam Protein tyrosine and serine/threonine kinase 391 495 IPR001245 GO:0004672|GO:0006468
Mtr4g1711 603 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 14 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1711 Mtr-Chr4 29774232 29776228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1711 16 603 Receptor kinase-like Gene Family AT2G23770 29.365 9.33e-66 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mtr4g1711 PK_Tyr_Ser-Thr 1.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1711 - - lja:Lj1g3v4047410.1 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1711 4 29774232 29776228 Mtr4g1711 4 29774232 29776228 ECH