Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1697 ATGCTTTCTCTTTCTGCCAAAACCATCACTACTTCTTCCTTGCTTCCTTGTCTTTTCTTCTTTGCGTCCTTGTCTCTTTCAAAGCTGTTTTCATCGCATTTTCTGCGACATCACAAATTAGGGTTCCAAAAAATCACGAGATTAACTTTCACTTCTATTGAGTTACGTTCATCATTCTTCATGGACAAAGATACATCAACTTCTTTTCAAATTCCTCAGGAATATGAATGTGTGCCAAACTGTGATGATGAATTAAAGCCTAAGATTGGACAAGTATTTGACACGTTACAAGAAGGTAAAATTTTTTACGAAAAATACGCACTCTCTATCGGATTTAGTGTGCGTTCATCATCATCGACTATAGATAAAAACGGCGTGAAGCGTTGGAAGTATTTTGTTTGCTCGAAAGAGGGTTATTTGCCAAATAAGACGGATGATAAGGAGCAAAGTGAATCTATTGTCAAGGCTAAAAGAAGAAGGGCTTTAACAAGAGAAGGATGCAATGCAAATGTTGTTTTTAAATGGGTGGGGGAAGGTAAGTATGAGATAACTCGATTTCATGAAAGCCATACACATCCACTTGCTTCACCTATGAAGAGACCGTTTCTAAGGTCTGCAAGGAAAGTGAATTCAAGTCACAAAAGCTTATTACTTGCATGTAGTAGAGCAAATATTGGACCTTCAAAAGCTTTCCACTTATTAAAAGAACAACGTGGGGGTTATGAAAATGTTGGATGCACGCAGAGAGATCTTCAAAACTATTCCAGAGATTTAAAGACTTTGAATAAAGATTCTGATGCACATGTTTTGATAGACTACTTTAGAAGGAAGCAAGAAGTTAATCCATCCTTTTATTATGCGTATGAGGTAGGTGAAGAAGGCCGACTGAAGCATGTTTTTTGGGCAGATGGTATTTGTAGGAAAAATTATTCCTTATTTGGAGATGTGGTTTCATTTGATACTACATATCAAACAAATAAATATCATTTGATTTTTGCACCTTTCATTGGGATAAACCATCATCGACAATCTATTACCTTCGGAGTAGGACTTATAACAAATGAGAAAAGTGATTCATTTGTATGGTTGTTTGAAAAGTTTTTGGAAGCAATGGGTGGACATAAGCCAACACTTATAATAACCGATCAAGATCCTTCCATGAAAGTGGCTATAGAAAATATTTTTGATACTTCTACTCATAGATTGTGCATGTGGCATATCATGAAAAAAGTTTCTGAAAAAGTAGGTGTTTCCACGAACGACAATGATGAGTTTAACAGAAGCTTCAAGTCATGTGTTTGGGGTTCAGAGACACCAAATGAGTTTGAAGAGAATTGGGCGTTTTTGATGACAAGGTTTGAGTTAGAAAAGAATAAATGGTTGTTACATATGTTTGATATTCGAAGCATGTGGATCCCAGCATACTTCAAAGACACTTTTATGGCTGGGATATTGAGAACAACATCAAGATCAGAAAGTGAGAATTCTTTTTATGGTAATTTCCTGAATCCTAATGTTAACTTGGTTGAATTTTGGATGAGGTTTGATTCAGCAATAGAAGCGCAACGGCATAAGGAGTTACTGGCTGATAATAACTCAATTCATTCTAAACCGAAACTAAAGTTGGAACGTGGTATAGAGAGGCATGCAAGAGATGTGTATACTCGTGAGAACTTTTATATATTTCAACATGAATTATGGATTGCATGCGTGGATTGTGGGATTGAAAATAGGAAAGATGAAGATGGGATGGAAATATTTCATATATATGATAATAGTGAGATCAACGGTAAACTTCGAGAAGTTGTGTATAACTTGTCCGATCACAATGCAAATTGCTCATGCAAAATGTTTCAGGCTGAAGGAATACCTTGTAGACACATACTTTGTGTTTTAAAGGGAAAAAATTTCAATGAAATACCAAGTAAGCACATTGTGAATAGGTGGACTAAGTTTGCAAACAGAACACCTATTTTTGACATAGCTGACAATGTCTTTGAAGAAGATAGCAAACTCATTTCTGATGTGTGGAACCACTTACATAGTTGTGTGGAGAAGGCTGGGAAAGATAAGGAAAGATTGCTTCTTGTGTTAAATGGGGCTGTTAACATGGAAAAACAATTGGACGAATTTGAAGGGAGTTCTAAGAGAACAAGGACAGATGATTTGATTCTTGGGTCCAATATTCCTGACGAAGTAGAAATCCTTTCACCACAATTTGCAAAGACTAAGGGTAGTGGTAAAAGAATCAAAGGTGGCAAAGAGAAGACTATTGAACAACAACAAAAAAAAGCAAGACTTTGTAAGGCATGCGGTGAGTATGTGCATCATGACAGCCGCAATTGTCCCCAAAGATCATCTCCATAA 2367 0.3638 MLSLSAKTITTSSLLPCLFFFASLSLSKLFSSHFLRHHKLGFQKITRLTFTSIELRSSFFMDKDTSTSFQIPQEYECVPNCDDELKPKIGQVFDTLQEGKIFYEKYALSIGFSVRSSSSTIDKNGVKRWKYFVCSKEGYLPNKTDDKEQSESIVKAKRRRALTREGCNANVVFKWVGEGKYEITRFHESHTHPLASPMKRPFLRSARKVNSSHKSLLLACSRANIGPSKAFHLLKEQRGGYENVGCTQRDLQNYSRDLKTLNKDSDAHVLIDYFRRKQEVNPSFYYAYEVGEEGRLKHVFWADGICRKNYSLFGDVVSFDTTYQTNKYHLIFAPFIGINHHRQSITFGVGLITNEKSDSFVWLFEKFLEAMGGHKPTLIITDQDPSMKVAIENIFDTSTHRLCMWHIMKKVSEKVGVSTNDNDEFNRSFKSCVWGSETPNEFEENWAFLMTRFELEKNKWLLHMFDIRSMWIPAYFKDTFMAGILRTTSRSESENSFYGNFLNPNVNLVEFWMRFDSAIEAQRHKELLADNNSIHSKPKLKLERGIERHARDVYTRENFYIFQHELWIACVDCGIENRKDEDGMEIFHIYDNSEINGKLREVVYNLSDHNANCSCKMFQAEGIPCRHILCVLKGKNFNEIPSKHIVNRWTKFANRTPIFDIADNVFEEDSKLISDVWNHLHSCVEKAGKDKERLLLVLNGAVNMEKQLDEFEGSSKRTRTDDLILGSNIPDEVEILSPQFAKTKGSGKRIKGGKEKTIEQQQKKARLCKACGEYVHHDSRNCPQRSSP* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1697 788 Pfam SWIM zinc finger 611 631 IPR007527 GO:0008270
Mtr4g1697 788 Pfam FAR1 DNA-binding domain 102 195 IPR004330 -
Mtr4g1697 788 Pfam MULE transposase domain 316 410 IPR018289 -
Mtr4g1697 788 ProSiteProfiles Zinc finger SWIM-type profile. 600 636 IPR007527 GO:0008270
Mtr4g1697 788 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 76 210 - -
Mtr4g1697 788 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 246 671 - -
Mtr4g1697 788 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 76 210 IPR031052 GO:0006355
Mtr4g1697 788 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 246 671 IPR031052 GO:0006355
Mtr4g1697 788 SMART 26again6 611 638 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1697 Mtr-Chr4 29551009 29554085 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr4g1697 MULE 8.1e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1697 - - soe:110798711 793.112