Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1690 ATGGTTGTTGTAGGTGGAATTTTGAAGCTCAAGAATAATGTCTTCAAAAAGCTCCAAAAAACCCTATTATTGGGAAGAAAGGATAATAAATCAAGGTATGAGGCAAAGGATGTGAAAAAAGGACATTTTGTTGTGATTGCTAAGGATGAAGATGAAGCAAAGAGATTTATTGTGCCATTGAGTTGTTTAACAAATCCAATATTTGTGAGTCTATTGGAAGAAGCAGCTGAAAAATATGGATTTAATGGAGATGGTGCAATTACAGTTCCTTGTCGACCTAATGAATTTCAGATGATATTGGAGCAGCAAATGCATGATGAAGCCATAGATGATATCAGAAAAATTAAAATTATTACACTTGGTGCAGACATGAACAACCGAGTACAGGCCCGTTTCATGGGTTGTCCTTTTGTTGAAAGCTTGTCTCTCAAATCTTGTGGTCCTTAA 447 0.3579 MVVVGGILKLKNNVFKKLQKTLLLGRKDNKSRYEAKDVKKGHFVVIAKDEDEAKRFIVPLSCLTNPIFVSLLEEAAEKYGFNGDGAITVPCRPNEFQMILEQQMHDEAIDDIRKIKIITLGADMNNRVQARFMGCPFVESLSLKSCGP* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1690 148 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 15 107 - -
Mtr4g1690 148 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 15 107 IPR003676 GO:0009733
Mtr4g1690 148 Pfam Auxin responsive protein 32 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1690 Mtr-Chr4 29400496 29401325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1690 37 100 Calmodulin-binding Proteins AT3G43120 42.188 2.67e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1690 - K14488 cam:101490087 145.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1690 4 29400496 29401325 Mtr4g1690 4 29400496 29401325 ECH
Mtr2g3278 2 46875473 46876114 Mtr4g1690 4 29400496 29401325 PCT