Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1689 ATGGTTGTTGTAGGTGGAATTTTGAAGCTCAAGAATAATGTCTTCATTAAGCTCCACAAAACCCTATTAATGGGAAGAAATGATTATAAATCAAGGTATGTGGCAAAGGATGTGAAAAAAGGACATTTTGTTGTGATTGCTAAGGATGAAGATGAAGATGAAGCAAAGAGATTTATTGTGCCATTGAGTTGTTTAGCAAATCCAATATTTGTGAGTCTATTGGAACAAGCAGCTGAAAAATTTGGATTTAATGGAGATGGTGCACTAACTATTCCTTGTAGGCCTAATGAACTTAAGATGTTATTGGTGCAGCAATTGCAGGATGAAGGAAGCTATTGCTCTGATCATGTCATGTTTATATGCTACCAAAGACGACCTAGTGGATATTTCAAGTTAAAGCAAATTGTATAA 411 0.3504 MVVVGGILKLKNNVFIKLHKTLLMGRNDYKSRYVAKDVKKGHFVVIAKDEDEDEAKRFIVPLSCLANPIFVSLLEQAAEKFGFNGDGALTIPCRPNELKMLLVQQLQDEGSYCSDHVMFICYQRRPSGYFKLKQIV* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1689 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 20 108 IPR003676 GO:0009733
Mtr4g1689 136 Pfam Auxin responsive protein 32 101 IPR003676 GO:0009733
Mtr4g1689 136 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 20 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1689 Mtr-Chr4 29391515 29391925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1689 30 102 Calmodulin-binding Proteins AT5G20810 43.836 3.82e-11 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1689 4 29391515 29391925 Mtr4g1689 4 29391515 29391925 ECH