Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1686 ATGGACGATGATTTAGCAGGGGAATTAAACAACATTGGTGGTTATAACATACGCGCAGCTAAGGAGAGGAAGTACGGTGGTTTCAACGGGGAGGATATTCCTCATGATATTGCTGCTCAGAGTATGTATGTGAATCAAGTTCAAATTCAACGTAGCACCCTTCAGACACATCTCAGACATTTCTACGAGATTGGTGGTTATAACATACGCGCAGCTAAGGAGAGGAAGTACGGTGGTTTCAACGGGGAGGTACGAGGTCCCAACATGATGCAAGGTTATTATAACAATCTAGAGGCCACAAAACAAACTTTAGGTAACGAGGGGTGCGTACATACAGGAGATCTTGGATATTTTGATGAGATCGGACAACTTTATGTTGTTGATCGTATGAAGGAACTGATCAAGTACAAAGGTTATAAGGTTGCGCCAGCAGCACTTGAAGATCTTCTTGTTTCTCATCCAGAAATACAAGATGTTGTCGTTATCCTTACTTATTGCTATAGATTTCCTGATGATGAGGCTGGTGAGGTTTCAATTGCCTATGTTGTTCGTTCACCCAATAGTTCGCTGTCCGAGGAAGAAATTAAGAAGTTTATTGCTAACCAGGTGAAAAAAAGCTAA 621 0.4155 MDDDLAGELNNIGGYNIRAAKERKYGGFNGEDIPHDIAAQSMYVNQVQIQRSTLQTHLRHFYEIGGYNIRAAKERKYGGFNGEVRGPNMMQGYYNNLEATKQTLGNEGCVHTGDLGYFDEIGQLYVVDRMKELIKYKGYKVAPAALEDLLVSHPEIQDVVVILTYCYRFPDDEAGEVSIAYVVRSPNSSLSEEEIKKFIANQVKKS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1686 206 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 84 203 - -
Mtr4g1686 206 Gene3D - 132 206 IPR045851 -
Mtr4g1686 206 Pfam AMP-binding enzyme 84 136 IPR000873 -
Mtr4g1686 206 SUPERFAMILY Acetyl-CoA synthetase-like 84 203 - -
Mtr4g1686 206 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 84 203 - -
Mtr4g1686 206 Gene3D - 78 131 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1686 Mtr-Chr4 29344302 29354112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1686 84 203 Monolignol Biosynthesis Gene Families AT4G05160 69.167 2.63e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1686 K01904 - egr:104434065 178.333