Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1685 ATGCAGAGATCAGGTTATGGTCCAGATGGAATTTACAGGTCCCTAAGACCTTCTCTAGCCCTCCCAAACAATCCAAACCTTTCCTTAGTCTCATTCCTCTTCACAAGTGTCTCCTCTTCCCCTAACAAAACCGCCCTCATCGACGCAGACTCTTCCCAAACACTCTCCTTCTCTCAACTCAAAACACAAGTTGCAAAACTTGCACACAGTTTACTAAACTTTGGCATAAACAAAAACGACGTCGTCCTCATCCTCTCCCCCAATAACATCGAATTCCCTGTATGTTTCCTAGCTGCTGCCTCCATCGGCGCAATAGTCACCACTGCAAATCCTCTTTACACCGTTGCGGAACTCTCCAAACAAATCAAGGATTCCAATCCTAAACTAGTCATCACTGTCCCTGAATTATGGAGCAAAGTGAAGAGTTTCAATTTCAACTTTCCAGCAATTATCATTAATTCGGGTAATGCAACGGGTTCATATTCAAACTTCAAGAGTTTTGAGGCGTTGATTGAATCAGCAGGGGAAGTAACAGAATTACCAGAAAACGATGTGAAACAGACCGATACAGCGGCACTTTTGTACTCATCAGGAACTACAGGAGTGAGCAAAGGTGTGATTCTCACACACAAGAACTTCATCGCAGCGTCGTTGATGATAAACATGGATGATGATTTAGCTGGGGAATTAAACAATGTGTTCATCTGCGTTTTACCGATGTTTCATGTGTTTGGATTGGCGGTTATAACATACGCACAGCTAAGGAGAGGAAGTACCGTGGTTTCGATGGGGAGGTTTGAGTTAGAGGGTTTTTTGAAGGTGATTGAGAAGTATAAAGTGACGAACTTGTGGGTTGTGCCACCGATGATTCTTGCTTTAGCGAAACAGAGTGTGGTTGGGAAATATGATGTTTCTTCTTTGAAGAGTATTGGGTCTGGTGCTGCTCCTCTTGGGAAGGAATTGATGGAAGAGTGTGCTCGACATCTACCTCATGTTGCTATTTATCAGGGGTATGGTATGACAGAAACTTGTGCCGTTGTTTCTATCGAGAATCCAAGAGTAGGTATTCGTCATTCTGGCTCAGCTGGAATGTTGGTTTCAGGAGTTGAAGCTCAAATAGTGAGTGTGGACACACAGAAGCCACTACCTCCAAAACAATTGGGGGAACTATGTGTAAGAGGTCCCAACATGATGGAAGGTTATTACAACAATCGAGAGGCCACAAAACAAACTTTAGATAATGAGGGGTGGGTGCATACCGGAGATCTTGGATATTTTGATGAGATTGGCCGACTTTATGTTGTTGATCGTATCAAAGAACTGATCAAATACAAAGGTTATCAGGTTGCACCAGCAGAACTTGAAGATCTTCTCGTTTCTCACCCTGAAATACAAGATGCTGTCGTTGTCCCATTTCCTGATGATGAGGCTGGTGAGGTACCAATTGCCTATGTTGTTCGTTTACCCAACAGTTCGCTGTCCGAGGAAGAAATTAAGAAGTTTATTGCTAACCAGGTTGCACCATTCAAAAGATTGCGAAGGGTGACATTCATCAACAGTGTTCCTAAGACAGCTTCGGGAAAAATTCTCAGAAGAGAGCTTATTGCAAAAGCACGATCCAACATATAA 1629 0.4309 MQRSGYGPDGIYRSLRPSLALPNNPNLSLVSFLFTSVSSSPNKTALIDADSSQTLSFSQLKTQVAKLAHSLLNFGINKNDVVLILSPNNIEFPVCFLAAASIGAIVTTANPLYTVAELSKQIKDSNPKLVITVPELWSKVKSFNFNFPAIIINSGNATGSYSNFKSFEALIESAGEVTELPENDVKQTDTAALLYSSGTTGVSKGVILTHKNFIAASLMINMDDDLAGELNNVFICVLPMFHVFGLAVITYAQLRRGSTVVSMGRFELEGFLKVIEKYKVTNLWVVPPMILALAKQSVVGKYDVSSLKSIGSGAAPLGKELMEECARHLPHVAIYQGYGMTETCAVVSIENPRVGIRHSGSAGMLVSGVEAQIVSVDTQKPLPPKQLGELCVRGPNMMEGYYNNREATKQTLDNEGWVHTGDLGYFDEIGRLYVVDRIKELIKYKGYQVAPAELEDLLVSHPEIQDAVVVPFPDDEAGEVPIAYVVRLPNSSLSEEEIKKFIANQVAPFKRLRRVTFINSVPKTASGKILRRELIAKARSNI* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1685 542 CDD 4CL 21 534 - -
Mtr4g1685 542 Gene3D - 9 439 IPR042099 -
Mtr4g1685 542 SUPERFAMILY Acetyl-CoA synthetase-like 20 539 - -
Mtr4g1685 542 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 541 - -
Mtr4g1685 542 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Mtr4g1685 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 541 - -
Mtr4g1685 542 Pfam AMP-binding enzyme 36 444 IPR000873 -
Mtr4g1685 542 Gene3D - 440 541 IPR045851 -
Mtr4g1685 542 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1685 Mtr-Chr4 29336138 29339261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1685 1 542 Monolignol Biosynthesis Gene Families AT4G05160 66.117 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1685 K01904 - gmx:100808944 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1685 4 29336138 29339261 Mtr4g1685 4 29336138 29339261 ECH
Mtr2g3282 2 46911283 46916004 Mtr4g1685 4 29336138 29339261 PCT