Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1679 ATGGCTCCGCCAATGCTTCTCCATGAGACAGCAGAAGATACTACCGTATCAGGTTACTTTATCCCAAAATCAACACGTGTTTGGATAAACGCGTGGGCAATTGGACGCGACAAAAGCGCTTGGGACGAGCCAGAGAAATTTAACCCGTCAAGGTTCTTGAACGAGGGTATGCCGGATTTCAAAGGAAGTAACTTCGAGTTCATTCCTTTTGGGTCAGGAAGAAGGTCATGTCCAGGGATGCAACTTGGACTCTATGCTGTGGAAATGACTGTGGCAAATTTGCTACATTGCTTCAAGTGGGAGTTACCTAATGGAATGAAACCAAGTGAGCTTGATATGAATGATGTGTTCGGTCTCACTGTTCCTAGAGCTGTTCAGCTTGTTGCTGTACCTAGTTATCGACTCAATTGTCCTCTTTGA 420 0.4524 MAPPMLLHETAEDTTVSGYFIPKSTRVWINAWAIGRDKSAWDEPEKFNPSRFLNEGMPDFKGSNFEFIPFGSGRRSCPGMQLGLYAVEMTVANLLHCFKWELPNGMKPSELDMNDVFGLTVPRAVQLVAVPSYRLNCPL* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1679 139 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 70 79 IPR017972 GO:0005506|GO:0016705
Mtr4g1679 139 Pfam Cytochrome P450 4 120 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g1679 139 SUPERFAMILY Cytochrome P450 4 131 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g1679 139 Gene3D Cytochrome P450 1 128 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g1679 139 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 4 139 - -
Mtr4g1679 139 PANTHER CYTOCHROME P450 84A1-RELATED 4 139 - -
Mtr4g1679 139 PRINTS E-class P450 group I signature 30 54 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g1679 139 PRINTS E-class P450 group I signature 67 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g1679 139 PRINTS E-class P450 group I signature 77 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1679 Mtr-Chr4 29275874 29276372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1679 4 139 Monolignol Biosynthesis Gene Families AT4G36220 72.059 1.89e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1679 K09755 - mtr:MTR_4g057645 291.582