Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1669 ATGAATTTACCTGTTCACAACAAAATAGCGGCCACACTCCCAGGTATCTCCTCTGTCATGGGAGGAGATAAGAGAATGGAAAGTGTCCATCAAGCAACCTCCTCGAAAAAGCCAAGGGGTAGACCCATTGGCTCAAAGAACAGGGCCAAAGCACCCATCATTGTCAACGAAAACATTGACAACCTCATGGAATTGATTTCCATTAAGATCCCTAAGGGGAATGATGTTGTGGAGACTCTCATAAATTTGTCTCTGTATCGTCAAGCTGGAATCACCGTGTTAAGTGCTTATGGTCTTGTTTCTAATGTGACGATTCTGAATCCGATTTTCGGTGTCCCTAATTTTCCAATTGAAGGAACATACCAAATGACATCTTTACATGGCACTTACCTGAAAGCCACTCATGGCCGCGTTCCTCCCCAATTAATTGCTGAGCCAACATTTTCCTCTTTTTCCATTTATATGAAGGCCAATTATGGCAATTACGTGTTTGGTGGAATCGTTGCGGGGAAGGTCAAGGCTGCTGGTGCTGTTTTCATTACAGCCGCTCTTTTGAAAAATCCAGAGTTTCATAGGGTGGCTGTTTTCAATGGCGGTGTCACCCGAACCATTGATGATTTTGCGCCAAATGTTGGTGTCATGGGTCCTGATTCGGCTCACCGGAATCAGCAAATGCTCCCTCTTCCTACTGATGTGAATGGCATGCATTGGGATATCTCCCCTAGCACTTGA 732 0.4481 MNLPVHNKIAATLPGISSVMGGDKRMESVHQATSSKKPRGRPIGSKNRAKAPIIVNENIDNLMELISIKIPKGNDVVETLINLSLYRQAGITVLSAYGLVSNVTILNPIFGVPNFPIEGTYQMTSLHGTYLKATHGRVPPQLIAEPTFSSFSIYMKANYGNYVFGGIVAGKVKAAGAVFITAALLKNPEFHRVAVFNGGVTRTIDDFAPNVGVMGPDSAHRNQQMLPLPTDVNGMHWDISPST* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1669 243 ProSiteProfiles PPC domain profile profile. 60 210 IPR005175 -
Mtr4g1669 243 Pfam Plants and Prokaryotes Conserved (PCC) domain 67 185 IPR005175 -
Mtr4g1669 243 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 30 225 IPR014476 GO:0003680
Mtr4g1669 243 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 30 225 - -
Mtr4g1669 243 MobiDBLite consensus disorder prediction 24 47 - -
Mtr4g1669 243 SUPERFAMILY AF0104/ALDC/Ptd012-like 63 193 - -
Mtr4g1669 243 Gene3D - 65 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1669 Mtr-Chr4 29168039 29168770 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1669 36 193 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.375 5.34e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1669 - - mtr:MTR_4g057525 477.248