Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1652 ATGGGTCAGATCCAGTACTCTGAGAAGTATTTCGATGACACTTATGAGTACAGGCATGTTGTTCTTCCTCCAGAGGTTGCGAAGTTGCTTCCCAAGAATCGACTTCTCTCTGAAAATGAATGGCGCGCAATTGGAGTGCAGCAGAGCCGTGGCTGGGTTCATTATGCAATTCATCGTCCTGAGCCACACATTATGCTCTTCAGAAGGCCATTGAATTATCAGCAGCAGCAGGACAACCAGGCCCAGCAGGGCATGCTGGTCAAATGA 267 0.4869 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQDNQAQQGMLVK* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1652 88 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Mtr4g1652 88 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 83 - -
Mtr4g1652 88 SMART CKS_2 3 72 IPR000789 GO:0016538
Mtr4g1652 88 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Mtr4g1652 88 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 83 - -
Mtr4g1652 88 SUPERFAMILY Cell cycle regulatory proteins 1 81 IPR036858 GO:0016538
Mtr4g1652 88 Gene3D - 1 83 IPR036858 GO:0016538
Mtr4g1652 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Mtr4g1652 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Mtr4g1652 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Mtr4g1652 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1652 1 80 Core Cell Cycle Gene Families AT2G27970 90.000 2.62e-52 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1652 K02219 - gmx:100786340 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1652 4 28947045 28949722 Mtr4g1652 4 28947045 28949722 ECH