Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr4g1649 | ATGGAAATCTACAACCGCAGGTTGCTCCTACTCAACGAGGATGTTCCAATCTCAACATCCATATCACCTTTTCCTCAAATCCAACCAAACGCATCTTCACCGTCCATTTCAATCACACCCCCATCAAAAACTTTTACACCCCCTCTACAATTACAATTACCATCCCATCCAATATTCTCTTCCAACATAGCCTACATCTTCCTCCTCCTCTTCTCCACCCTTTTCTTCCTTGCCTTCATCCTCTTATCATTTCGCGAACTTTCCTTCCGACGCCGGCGTAGATATTCACTGCGGCAGGGTTTGGATTCTGCCGCGGTGAAGTCTCTGCCGATGTGTGAGTATAAGGAAGATGTTAAGCAACCAGACTGTGTGATATGTTTGGAGGAGTTTGAAGTTTGCGAGGAGGTGAAGATGATTCCATATTGTAAGCACGTGTTTCATGCGGAGTGTATTGACACGTGGCTTTCTGCGCACGTGACATGCCCTATCTGCAGGTGTGTTATTGTCGTTTGTGGCGGTGGTGGGAATGTGGATGAGCATGTGGGAAGATCAACGGTTGAGAATGAAGGAGATGGAGAAGTGGGGTAG | 588 | 0.4694 | MEIYNRRLLLLNEDVPISTSISPFPQIQPNASSPSISITPPSKTFTPPLQLQLPSHPIFSSNIAYIFLLLFSTLFFLAFILLSFRELSFRRRRRYSLRQGLDSAAVKSLPMCEYKEDVKQPDCVICLEEFEVCEEVKMIPYCKHVFHAECIDTWLSAHVTCPICRCVIVVCGGGGNVDEHVGRSTVENEGDGEVG* | 196 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr4g1649 | 195 | PANTHER | RING-H2 FINGER PROTEIN ATL57 | 46 | 178 | - | - | |
Mtr4g1649 | 195 | SMART | ring_2 | 123 | 164 | IPR001841 | - | |
Mtr4g1649 | 195 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 88 | 169 | IPR013083 | - | |
Mtr4g1649 | 195 | PANTHER | RING FINGER DOMAIN-CONTAINING | 46 | 178 | - | - | |
Mtr4g1649 | 195 | SUPERFAMILY | RING/U-box | 108 | 170 | - | - | |
Mtr4g1649 | 195 | CDD | RING-H2_EL5_like | 122 | 165 | - | - | |
Mtr4g1649 | 195 | Pfam | Ring finger domain | 122 | 165 | IPR001841 | - | |
Mtr4g1649 | 195 | ProSiteProfiles | Zinc finger RING-type profile. | 123 | 165 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr4g1649 | Mtr-Chr4 | 28872436 | 28873023 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr4g1649 | 59 | 165 | C3H Transcription Factor Family | AT2G27940 | 42.336 | 2.04e-28 | 104 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr4g1649 | - | K10664 | mtr:MTR_4g056590 | 331.643 |