Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1640 ATGGAGAGAAAAGGAATCAACAATGATTACAGTTCAGAAGATGAAGGTACTGAACACTATAGGCGTGGTGGGTATCATGCTGTGAAACTTGGTGATGCTTTCAACAATGGCTGCTATGTTGTTCAATCTAAGCTTGGTTGGGGTCATTTTTCTACTGTTTGGCTTGCTTGGGATACTCTCAAATCGCGTTATGTGGCCCTTAAAATTCAAAAGAGTGCGCAACACTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAAATTGAAGAGGGAGACCCTGACGACAAAAAATGTGTTGTGAAGCTTTTGGATCATTTTAAGCATTCAGGGCCTAATGGTGTGCATGTGTGTATGGTTTTTGAATTCCTTGGTGATAATCTTCTCACCCTTATCAAATATAGTGACTATCGTGGAGTTCCTCTCTCCATGGTGAAAGAGATATGTTTTCATGTTCTAGTGGGCTTGGATTACTTGCACCGTGAGCTATCTGTCATACACACTGATTTGAAGCCTGAGAATGTGTTACTTCATTCACTGATTGATCCGTCAAAGGATCCAAGGAAATCTGGTGCTCCACTTATCCTTCCAAACACCAAGAATAAGGCTGTGTCTAATAATGACATTACTCAAAACTGTAAAATTGGGAATGGAGATCCTACGAAGAACCAGGAGAAGAAAATGAAGGGAAAGGGTAAGAGGGTGGCTCAAGGCTGTGTTGAGAAGGAAAGTCCAGATGAATCTGGGGAGGATTGTAAAGAACCTGAGCAGGATAATTGTAACAATGTGAAATCCTGTGTAGAATCTGTTGAAAACAAACCCAATAGCTCTTCGAGTAAAGGTGAATCAACACAGACCATTGAAAAAGACCTTGCACCAGGAAATGACGCTCATAAGAAAAGTAGCCGTTCCATGAGAAAGAAGCTGCTGGCAGCTGTTGATCTTAAGTGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACTTATAAACAGTTCACAAATGATATTCAAACAAGGCAATATAGGTGTCCTGAGGTCCTTCTTGGTTCTAAGTACTCAACTCCAGCAGATATGTGGTCCTTTGCTTGCATCTGCTTTGAGCTTGCTACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAACTTCTTGGAAAGATGCCTAGCAAGATTGCACTTGGTGGCCGCTATTCCCGAGATTTTTTCAATAGACATGGTGACTTGAGGCACATCCGTGAGTTGCGATTCTGGCCGAAAAAAAAGATTCTGATGGAGAAGTATAATTTCAGTGAACAAGATGCAAATGAAATGGCTGACTTCCTTCTTCCAATACTTGATTTTGACCCTGAAAAGAGGCCAACAGCTGCTCAGTGCCTTACCCATCCATGGATAAGTGCAGGTCCTCGAACTCTTGAGCCCTCACTGACTAGTACACAACCTGATGCAATCAATGAGCATTCATTTGAAAAGAGAAGGAAGGACAAGGAAAAGGCTGAGCAGGAGTTGGTGGAAGTTGGTGTTAGGAATATAGCTATTAATGGATCTCCTATGTCACTCAAAAACTCCCGACCCGTAAAGTCATCAACATAG 1632 0.4185 MERKGINNDYSSEDEGTEHYRRGGYHAVKLGDAFNNGCYVVQSKLGWGHFSTVWLAWDTLKSRYVALKIQKSAQHYTEAAMDEIKILKQIEEGDPDDKKCVVKLLDHFKHSGPNGVHVCMVFEFLGDNLLTLIKYSDYRGVPLSMVKEICFHVLVGLDYLHRELSVIHTDLKPENVLLHSLIDPSKDPRKSGAPLILPNTKNKAVSNNDITQNCKIGNGDPTKNQEKKMKGKGKRVAQGCVEKESPDESGEDCKEPEQDNCNNVKSCVESVENKPNSSSSKGESTQTIEKDLAPGNDAHKKSSRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGKMPSKIALGGRYSRDFFNRHGDLRHIRELRFWPKKKILMEKYNFSEQDANEMADFLLPILDFDPEKRPTAAQCLTHPWISAGPRTLEPSLTSTQPDAINEHSFEKRRKDKEKAEQELVEVGVRNIAINGSPMSLKNSRPVKSST* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1640 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Mtr4g1640 543 MobiDBLite consensus disorder prediction 484 510 - -
Mtr4g1640 543 PANTHER SERINE KINASE-LIKE PROTEIN 8 540 - -
Mtr4g1640 543 MobiDBLite consensus disorder prediction 260 291 - -
Mtr4g1640 543 SUPERFAMILY Protein kinase-like (PK-like) 35 490 IPR011009 -
Mtr4g1640 543 Gene3D Transferase(Phosphotransferase) domain 1 122 479 - -
Mtr4g1640 543 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 540 - -
Mtr4g1640 543 MobiDBLite consensus disorder prediction 221 259 - -
Mtr4g1640 543 ProSitePatterns Protein kinases ATP-binding region signature. 45 68 IPR017441 GO:0005524
Mtr4g1640 543 SMART serkin_6 39 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1640 543 MobiDBLite consensus disorder prediction 210 304 - -
Mtr4g1640 543 CDD STKc_SRPK 28 478 - -
Mtr4g1640 543 Gene3D Phosphorylase Kinase; domain 1 15 121 - -
Mtr4g1640 543 ProSiteProfiles Protein kinase domain profile. 39 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1640 543 Pfam Protein kinase domain 315 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1640 543 Pfam Protein kinase domain 39 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1640 Mtr-Chr4 28706283 28711381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1640 8 529 EF-hand Containing Proteins AT5G22840 64.896 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Mtr4g1640 Pkinase 5.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1640 K08832 - gmx:100790060 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1640 4 28706283 28711381 Mtr4g1640 4 28706283 28711381 ECH
Mtr2g2831 2 41818514 41824993 Mtr4g1640 4 28706283 28711381 PCT