Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1611 ATGGATCGACCAATGGAGTTTTGGGGTGTTGAGGTTAAGGCTGGACAATCGGTTAAAGTTGATCCAAATGATCAATGTACGGGATACATTCACATTTCTCAAGTTGCACTTGGGGAAGGGAAGAAAGGCGAAGCAAGTGAATCTGTTGTTCTGTATTTGAAAGTTGCTGATATGAAGTTTGTTATAGGAACTCTTACTAAGGATTCCTTTCCTCAGACTACCTTGAATATCGTTCTAGACGGGGAGTCTGAACTTTCTCACAATTCAAAGGGCGCAAGTGTCCATTTTTCTGGATACAAACTTATTTGCGGTGGTGATGATGATGACTCTGACAGTTCTGATAGTGAACCTGAACTTGCTCCTTTGGTGGACCGTGCTCAAGCTTTGAAGGCTGCTAATTCTGGTAAACCTGCTGAACCTGAAGAAGAATCAGAGTCTGATTTTTCTGGGTCTGATATTTCAATCAATGAAGAGAGTGATACTGAGGAGAGTGAGAGTGAAGAAGAGACTCCTGCTAGTGAGAGTGAAGAAGAGACTCCTGCTAAAAAGGTGGATGAGGGCAAGAACAAAAAGAGAACAAATGAGACCGGATCACAAACTCCCGTTCCTACCAAGAAAGCTAAAGATGCTACTCCTGAAAAGACTGATGGTAAAAAAAGTGTGCATATAGCAACTCCCCACCCTATGAAGAAGGGTGGAAAAACTCCTCAGAATGCTGCAAAGGACCAGAGTCCCATTTCTAAGAAGCCTGCTACCACCAAATCTGGTCAACAAAATAAAAAGTCTAAGCAAGATCGCCGTTGA 804 0.4266 MDRPMEFWGVEVKAGQSVKVDPNDQCTGYIHISQVALGEGKKGEASESVVLYLKVADMKFVIGTLTKDSFPQTTLNIVLDGESELSHNSKGASVHFSGYKLICGGDDDDSDSSDSEPELAPLVDRAQALKAANSGKPAEPEEESESDFSGSDISINEESDTEESESEEETPASESEEETPAKKVDEGKNKKRTNETGSQTPVPTKKAKDATPEKTDGKKSVHIATPHPMKKGGKTPQNAAKDQSPISKKPATTKSGQQNKKSKQDRR* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1611 267 MobiDBLite consensus disorder prediction 237 258 - -
Mtr4g1611 267 MobiDBLite consensus disorder prediction 207 223 - -
Mtr4g1611 267 MobiDBLite consensus disorder prediction 175 193 - -
Mtr4g1611 267 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 5 255 - -
Mtr4g1611 267 Gene3D Nucleoplasmin core domain 3 103 - -
Mtr4g1611 267 MobiDBLite consensus disorder prediction 130 267 - -
Mtr4g1611 267 Pfam Nucleoplasmin-like domain 7 99 IPR041232 -
Mtr4g1611 267 MobiDBLite consensus disorder prediction 156 174 - -
Mtr4g1611 267 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 5 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1611 Mtr-Chr4 28238200 28242017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1611 5 234 C2H2 Transcription Factor Family AT5G03740 36.260 1.87e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1611 - - mtr:MTR_4g055440 457.988