Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1607 ATGAGATTAGAGAAGTGTTGGTTCTGTTCTTCTACTGTATATCCTGGTCATGGGATCCAGTTTGTTCGTAATGATGCTAAGATTTTTCGATTTTGTAGATCCAAGTGCCACAAAAATTTCAAAATGAAGAGGAATCCTCGGAAAGTAAAATGGACCAAGGCATATAGGCGGGTGCATGGAAAGGACATGACACAGGATTCAACCTTTGAGTTTGAGAGAAAACGCAACAGACCTGAGAGATATGACAGGAATCTTACCGAGGAAGTCCTCAAGGCCATTCCAAAGATTGCTAAGATCCAAGTCAGCAGGGCTGAATCTCACCACGCTATCAGGATGAAGGGCAAGAAGAAGAAGGTGCAGAAGGAAGCTGCTAAAGAGTATGAGCAGAGCATCCATCTACTTAAAGCTCCATCTGCTTTGCTTGCGCCGGAGAAGATCAAGGTGGCGGTTTCCCAACAAGCAGAGGAGAATCGTGTCATGGAAGAGTGA 489 0.4458 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLTEEVLKAIPKIAKIQVSRAESHHAIRMKGKKKKVQKEAAKEYEQSIHLLKAPSALLAPEKIKVAVSQQAEENRVMEE* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1607 162 PANTHER BNAA04G10330D PROTEIN 1 162 - -
Mtr4g1607 162 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Mtr4g1607 162 PANTHER 60S RIBOSOMAL PROTEIN L24 1 162 IPR000988 -
Mtr4g1607 162 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Mtr4g1607 162 SMART 4TRASH 6 44 IPR011017 -
Mtr4g1607 162 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Mtr4g1607 162 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Mtr4g1607 162 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1607 Mtr-Chr4 28147009 28149683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1607 1 162 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 68.098 5.35e-79 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1607 K02896 - ming:122057391 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1607 4 28147009 28149683 Mtr4g1607 4 28147009 28149683 ECH