Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1603 ATGGAAAATCACAAGAAATCCCCGTCCCTTAGTCTTGAAACCAAGGACATTGTGATTGTTAAACCCTCCATGCCCACACCTTCTGAAATTCTTTCACTTTCCACCATTGACAATGATCCTAACATCAACATTCTTTGCCAAACAATTTATGTCTACAAACCAAATCTTGATTTCCCAAATGACAAAAAAGACCCTGCTTGTGTAATCAAAGAAGCACTCTCAAAAGCTTTGGTATACTATTATCCTCTTGCAGGAAAGATAACAACACTTGATGATGGAAAACTTGGAATCAATTGCAATGGTGATGGAGTTCCATTCTTGGAATCAAATGCTAATTGTGAACTCTCTTCCCTTCATTATCTTGAAGGGATTGATGTTCCAACAGCACAAAAATTAGTGTTTGATAACCCTTCTCAAGATCAAACTAGTCCTCATCCTTTGGTTTTCAAGGTGACAAAGTTTCTTTGTGGTGGTTTCACAATTGGAATGGGATTGTCACATAGTGTTTGTGATGGTTATGGTGCATCTCAATTCTATAGAGCACTTGCTGAACTTGCAAGTGGTAAAAATGAACCATCCTTGAAACCTGTTTGGGAGAGAGAGAGATTAACAGCGAAAAGTACTCTTAAAGAACAACCATTTCAATTTCTCATAGATAAGACTTCAATAGCAACTTCCCCTTTTTTACCAACTAAAGAAATTTCACATGAATGTTTTAACTTAAATGGTGACACTATAAAAAGGCTCAAAATGAAACTAATGAAGGAAAGTGATGATGGGAAACATGTAATAAAGGAAAATTTCACAACACTTGAAACACTTGGTGCATATGTTTGGAAGTCAAAGGTAAAAGCTTTGAAATTGAACAATGATGGGAAAACTATGTTTTGTTTAGCAGTAGGGGTGAGAAAACTTTTGGATCCACCTTTGCATGAAGGTTATTATGGCAATGCTTTTGTGGCTTCAAATGTGGTATTAAAGGTGAAAGAGCTTAATGAAAAACCACTTTTTGAAATTGTTAAGCTTATAAAAGAGAGTAAAAAGCTTCCTTTGAATAATGAATATATAAAAAATTCAATTAATATATTGGAGACAATGAGGAAAAGGAATATTAGGATTGAAGGAACTGGTGCATCATTGGTGTTAACTGATTGGAGACAACTTGGTTTGTTGCAAGAAGTTGATTTTGGATGGAAAGATTCAGTGAATATTGTGCCTGTTCCTTGGAACATGTTTGGTTTTGTGGATTTGTGCCTTTTTTTGCCTCCAAATAATTTGGATCCTTCAATGAAAGGAGGAGTTAGGATCTTTGTGTCACTTCCAAAAGCTTCAATGGCTAAGTTTAAGGAGGAGATGGAATTCCTTAAGGTCATGAAAGTTGATGAAGATAGTTCCTAG 1398 0.3548 MENHKKSPSLSLETKDIVIVKPSMPTPSEILSLSTIDNDPNINILCQTIYVYKPNLDFPNDKKDPACVIKEALSKALVYYYPLAGKITTLDDGKLGINCNGDGVPFLESNANCELSSLHYLEGIDVPTAQKLVFDNPSQDQTSPHPLVFKVTKFLCGGFTIGMGLSHSVCDGYGASQFYRALAELASGKNEPSLKPVWERERLTAKSTLKEQPFQFLIDKTSIATSPFLPTKEISHECFNLNGDTIKRLKMKLMKESDDGKHVIKENFTTLETLGAYVWKSKVKALKLNNDGKTMFCLAVGVRKLLDPPLHEGYYGNAFVASNVVLKVKELNEKPLFEIVKLIKESKKLPLNNEYIKNSINILETMRKRNIRIEGTGASLVLTDWRQLGLLQEVDFGWKDSVNIVPVPWNMFGFVDLCLFLPPNNLDPSMKGGVRIFVSLPKASMAKFKEEMEFLKVMKVDEDSS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1603 465 Pfam Transferase family 11 454 - -
Mtr4g1603 465 PANTHER ACYL TRANSFERASE 4 4 456 - -
Mtr4g1603 465 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 456 - -
Mtr4g1603 465 Gene3D - 229 452 IPR023213 -
Mtr4g1603 465 Gene3D - 9 215 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1603 Mtr-Chr4 28103385 28105066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1603 10 450 Monolignol Biosynthesis Gene Families AT5G48930 26.974 5.12e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1603 K20240 - gmx:100801843 721.079