Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1598 ATGAAGACACTATACACTGACAGAACAAACCTTATTAATTTACCATTTTGCCACTCTTCCCAATTCTTCTCTCCAAACCCAAATGTTCCATCATTATTCATTCCTTCCACACATACCAGAAAATTAACACCAAAATCTTCTTCCATTTCCTTAAAAAACACTCTCTTTTCTCCGATTCAAGCTTCAATGGCTTCATCAACAGTCACAGAAGACACAAACAAACCATTCTCCGTTCTCTTTGTATGTCTTGGCAACATCTGTAGAAGCCCAGCTGCTGAAGGTGTTTTCACAGACTTAGTTAAGAAAAGGGGTTTTGATTCAAAGTTCAGAATTGATTCTGCTGGTACAATCGGTTATCATGAAGGTAATGAAGCTGATTCTAGAATGAAGGCAGCTTCTAAAAGACGTGGGATTCAGATCACTTCAATTTCAAGGCCAATCAAGCCTTCTGATTTTGTTGAGTTTGATCTTATTCTTGCTATGGACAAGCAAAATAGAGAGGATATAATGGAAGCTTTTAGTAGATGGAAGTTTAGAGATCCTTTACCCGAAGATGCACATAAAAAGGTTAAGTTGATGTGCTCATATTGTAAGAAGCATGATGAAACTGAAGTCCCGGATCCTTACTATGGTGGACCTCAAGGTTTTGAGAAGGTGTTAGATATGCTTGAAGATGCTTGTGAATCATTGCTGGATAGCATTTTGGCAGAAAATAAACATATACAAGAATCCTAA 735 0.3741 MKTLYTDRTNLINLPFCHSSQFFSPNPNVPSLFIPSTHTRKLTPKSSSISLKNTLFSPIQASMASSTVTEDTNKPFSVLFVCLGNICRSPAAEGVFTDLVKKRGFDSKFRIDSAGTIGYHEGNEADSRMKAASKRRGIQITSISRPIKPSDFVEFDLILAMDKQNREDIMEAFSRWKFRDPLPEDAHKKVKLMCSYCKKHDETEVPDPYYGGPQGFEKVLDMLEDACESLLDSILAENKHIQES* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1598 244 Gene3D - 59 239 - -
Mtr4g1598 244 PRINTS LMW phosphotyrosine protein phosphatase signature 78 95 IPR017867 GO:0004725|GO:0006470
Mtr4g1598 244 PRINTS LMW phosphotyrosine protein phosphatase signature 121 137 IPR017867 GO:0004725|GO:0006470
Mtr4g1598 244 PRINTS LMW phosphotyrosine protein phosphatase signature 205 220 IPR017867 GO:0004725|GO:0006470
Mtr4g1598 244 Pfam Low molecular weight phosphotyrosine protein phosphatase 78 231 IPR023485 -
Mtr4g1598 244 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 13 239 - -
Mtr4g1598 244 SUPERFAMILY Phosphotyrosine protein phosphatases I 74 234 IPR036196 -
Mtr4g1598 244 SMART LMWPc_2 76 233 IPR023485 -
Mtr4g1598 244 CDD LMWPTP 77 232 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1598 14 238 Protein tyrosine phosphatase (PTP) family AT3G44620 56.420 1.03e-92 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1598 K25307 - gmx:100797254 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1598 4 28049901 28052963 Mtr4g1598 4 28049901 28052963 ECH