Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1594 ATGAATTTTTATCCTCCTTACTTAAAAAATCAAAACCAAAACCTTCTATACTTCACTGAAGATTCTCTCTCTAATATCTATTGGGAATTAGAAGATGTCGTTAATTACTTCAATGGTGATATCAATTTCAAGAAGGACTCACAATCACAAACAAAGGAATCATTATTATTACCATTATCTTTATATGCTGAATCCAACTCTTCATTTCCATTGCTAAGCAATGGATCACTAGAAGTCTCATATAATAATACTACTATTTATACACAAGTGATCAAAGAAACAGAAACATCATTGTCATTGCCATCCAAAAAGAACAAAAACAAAAAGAAGACATCGTCATTAGCATCATCCTTGCCACTACCAGCAATTAAAGAAAGTAACAAAAGGGTGCTTAGAGGAGTACGAAGAAGGCCATGGGGGAAATTCGCGGCCGAGATAAGGGACTCGACAAGAAAAGGGGCTAGGGTATGGCTTGGAACATTCAACACGGAGGAAGAAGCCGCTTTAGCTTATGACCAAGCCGCTTTTTCAGCAAAAGGTTCATTGGCAGTGTTGAATTTTCCGGAGGATGTAGTTAAAGATTCACTCAAAGAAATGGCTATAAATTCTGAGCCTTTAGAAGAAGGTACTTCTCCTGTGTTGGCAATCAAGAGAAAAATCAAGAGAGAACACATTGCGAGAAAATCATCCAATGAGGTTAGTAAAAAGAAAATAAAAATTGATCATAATGGTGATCGAACAAAGAGAGAGACCAATACTAAATCTAAACATGTGTTTGTCTTTGAAGATTTGGGTGCTGAATATCTTGAGCAACTATTGAGCTTAACTTCTTAG 834 0.3597 MNFYPPYLKNQNQNLLYFTEDSLSNIYWELEDVVNYFNGDINFKKDSQSQTKESLLLPLSLYAESNSSFPLLSNGSLEVSYNNTTIYTQVIKETETSLSLPSKKNKNKKKTSSLASSLPLPAIKESNKRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDVVKDSLKEMAINSEPLEEGTSPVLAIKRKIKREHIARKSSNEVSKKKIKIDHNGDRTKRETNTKSKHVFVFEDLGAEYLEQLLSLTS* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1594 277 CDD AP2 132 190 IPR001471 GO:0003700|GO:0006355
Mtr4g1594 277 Gene3D AP2/ERF domain 131 190 IPR036955 GO:0003700|GO:0006355
Mtr4g1594 277 ProSiteProfiles AP2/ERF domain profile. 130 188 IPR001471 GO:0003700|GO:0006355
Mtr4g1594 277 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 62 275 - -
Mtr4g1594 277 Pfam AP2 domain 131 180 IPR001471 GO:0003700|GO:0006355
Mtr4g1594 277 SUPERFAMILY DNA-binding domain 131 189 IPR016177 GO:0003677
Mtr4g1594 277 PANTHER DNA-BINDING DOMAIN 62 275 IPR044808 GO:0003700|GO:0009873
Mtr4g1594 277 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Mtr4g1594 277 PRINTS Ethylene responsive element binding protein signature 154 170 IPR001471 GO:0003700|GO:0006355
Mtr4g1594 277 SMART rav1_2 132 194 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1594 Mtr-Chr4 27932061 27932894 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1594 118 273 AP2-EREBP Transcription Factor Family AT3G23240 50.955 5.89e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr4g1594 AP2 3.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1594 K14516 - gmx:100801682 202.986