Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1591 ATGAACTTTTATTCTCCTGTCTTAAAAAACCAAAACCAAAACTGCACTGAAAATTCCTTCTCAAATAATATCTCTTGGGAATTCGAAGATTATGTTAATTTCTTCAATGATGATATCAATTCCAGCAAGAACTCACAATCACTAACAAATGAATCATTATTATTACCATCATTATCTGCTGAATCCCACTCTTCATTATCCAATACAACTTATACACAAGTGATCAAAGAGACACAAACATCATCATCCTTACCACCACAGCCAATTAAAGAAAGTAATAAAAGGGTGTTTAGAGGTATAAGAACAAGGCCATGGGGGAAATTCGCGGCGGAGATAAGGGACTCAACAAGAAAAGGGGCTAGAGTATGGCTTGGAACATTCAACACGGCCGAAGAAGCTGCTTTAGCTTACGACCAAGCCGCTTATTTAGCAAGAGGTTCATTGGCTGTGTTGAATTTTCCAGAAGAAGTAGTTAAAGAATCACTCAAAGAAATGTCTAGAAATTCTAAGCCTTTGGAAGAAGGTACTTCGCCTGTGTTGGCAATAAAGAGAAAACACGTAATGAGGAAATCACCCAATAAGGTTAGTAAAAAAAAAATTAAAACTGATCATCATAGTGATCGAATTCAGAGAGAAACCAATACTAAATCTCAAAATGTGTTTGTGTTTGAGGATTTGGGTTCAGAATATCTGGAGTATTTATTGAGCTTGACATCTTAG 720 0.3597 MNFYSPVLKNQNQNCTENSFSNNISWEFEDYVNFFNDDINSSKNSQSLTNESLLLPSLSAESHSSLSNTTYTQVIKETQTSSSLPPQPIKESNKRVFRGIRTRPWGKFAAEIRDSTRKGARVWLGTFNTAEEAALAYDQAAYLARGSLAVLNFPEEVVKESLKEMSRNSKPLEEGTSPVLAIKRKHVMRKSPNKVSKKKIKTDHHSDRIQRETNTKSQNVFVFEDLGSEYLEYLLSLTS* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1591 239 SUPERFAMILY DNA-binding domain 96 155 IPR016177 GO:0003677
Mtr4g1591 239 SMART rav1_2 96 160 IPR001471 GO:0003700|GO:0006355
Mtr4g1591 239 Pfam AP2 domain 96 145 IPR001471 GO:0003700|GO:0006355
Mtr4g1591 239 Gene3D AP2/ERF domain 96 156 IPR036955 GO:0003700|GO:0006355
Mtr4g1591 239 ProSiteProfiles AP2/ERF domain profile. 96 154 IPR001471 GO:0003700|GO:0006355
Mtr4g1591 239 PANTHER DNA-BINDING DOMAIN 17 236 IPR044808 GO:0003700|GO:0009873
Mtr4g1591 239 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 17 236 - -
Mtr4g1591 239 MobiDBLite consensus disorder prediction 191 210 - -
Mtr4g1591 239 CDD AP2 97 155 IPR001471 GO:0003700|GO:0006355
Mtr4g1591 239 PRINTS Ethylene responsive element binding protein signature 97 108 IPR001471 GO:0003700|GO:0006355
Mtr4g1591 239 PRINTS Ethylene responsive element binding protein signature 120 136 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1591 Mtr-Chr4 27879813 27880532 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1591 73 236 AP2-EREBP Transcription Factor Family AT3G23240 52.381 7.81e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr4g1591 AP2 1.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1591 K14516 - gmx:100779524 188.348